Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16670
Experiment: Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,773,817 | + | BPHYT_RS16665 | 0.39 | -0.3 | |
3,774,004 | - | BPHYT_RS16665 | 0.83 | -0.2 | |
3,774,004 | - | BPHYT_RS16665 | 0.83 | +0.1 | |
3,774,612 | + | +0.2 | |||
3,774,893 | + | BPHYT_RS16670 | 0.24 | -0.8 | |
3,774,914 | - | BPHYT_RS16670 | 0.27 | -0.0 | |
3,775,114 | + | BPHYT_RS16670 | 0.51 | +0.2 | |
3,775,281 | + | BPHYT_RS16670 | 0.71 | +0.1 | |
3,775,281 | + | BPHYT_RS16670 | 0.71 | +0.1 | |
3,775,282 | - | BPHYT_RS16670 | 0.71 | +0.1 | |
3,775,282 | - | BPHYT_RS16670 | 0.71 | +0.0 | |
3,775,293 | - | BPHYT_RS16670 | 0.72 | -0.6 | |
3,775,365 | + | BPHYT_RS16670 | 0.81 | +0.1 | |
3,775,365 | + | BPHYT_RS16670 | 0.81 | +0.0 | |
3,775,407 | - | BPHYT_RS16670 | 0.86 | +0.4 | |
3,775,536 | - | +0.5 | |||
3,775,536 | - | +0.5 | |||
3,775,920 | - | BPHYT_RS16675 | 0.36 | -1.6 | |
3,776,027 | + | BPHYT_RS16675 | 0.46 | +0.1 | |
3,776,184 | + | BPHYT_RS16675 | 0.61 | +0.8 |
Or see this region's nucleotide sequence