Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15395

Experiment: Thallium(I) acetate 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thallium(I) acetate 0.01 mg/ml
3,494,327	+		BPHYT_RS15390	0.52	+0.4
3,494,411	+		BPHYT_RS15390	0.59	+0.4
3,494,411	+		BPHYT_RS15390	0.59	+0.3
3,494,714	+		BPHYT_RS15390	0.86	+0.8
3,494,714	+		BPHYT_RS15390	0.86	+0.7
3,494,736	+		BPHYT_RS15390	0.88	+1.0
3,494,736	+		BPHYT_RS15390	0.88	+0.0
3,495,474	-		BPHYT_RS15400	0.11	+0.1
3,495,956	+				-0.8
3,495,956	+				+1.3
3,495,957	-				+0.8
3,495,957	-				-0.1
3,496,003	-				+0.0
3,496,008	+				+0.9
3,496,072	+				-0.1
3,496,073	-				+0.3
3,496,073	-				-0.6
3,496,134	+		BPHYT_RS15405	0.10	-0.6
3,496,134	+		BPHYT_RS15405	0.10	+0.4
3,496,135	-		BPHYT_RS15405	0.11	+0.5
3,496,135	-		BPHYT_RS15405	0.11	-0.0
3,496,219	+		BPHYT_RS15405	0.18	-0.1
3,496,220	-		BPHYT_RS15405	0.18	-0.5
3,496,270	+		BPHYT_RS15405	0.22	-0.4
3,496,271	-		BPHYT_RS15405	0.22	-0.4
3,496,282	+		BPHYT_RS15405	0.23	-0.1
3,496,282	+		BPHYT_RS15405	0.23	+0.0
3,496,282	+		BPHYT_RS15405	0.23	-1.3
3,496,282	+		BPHYT_RS15405	0.23	+0.1
3,496,282	+		BPHYT_RS15405	0.23	-0.1
3,496,402	+		BPHYT_RS15405	0.33	+1.0
3,496,403	-		BPHYT_RS15405	0.33	-0.3