Experiment: Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS10965 and BPHYT_RS10970 are separated by 78 nucleotides BPHYT_RS10970 and BPHYT_RS10975 are separated by 57 nucleotides BPHYT_RS10975 and BPHYT_RS10980 are separated by 328 nucleotides BPHYT_RS10980 and BPHYT_RS10985 are separated by 38 nucleotides
BPHYT_RS10965: BPHYT_RS10965 - hypothetical protein, at 2,494,335 to 2,494,724
_RS10965
BPHYT_RS10970: BPHYT_RS10970 - hypothetical protein, at 2,494,803 to 2,495,051
_RS10970
BPHYT_RS10975: BPHYT_RS10975 - hypothetical protein, at 2,495,109 to 2,495,351
_RS10975
BPHYT_RS10980: BPHYT_RS10980 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase, at 2,495,680 to 2,496,927
_RS10980
BPHYT_RS10985: BPHYT_RS10985 - MFS transporter, at 2,496,966 to 2,498,264
_RS10985
Position (kb)
2495
2496
2497 Strain fitness (log2 ratio)
-1
0
1 at 2495.160 kb on - strand, within BPHYT_RS10975 at 2495.482 kb on + strand at 2495.483 kb on - strand at 2495.662 kb on - strand at 2495.750 kb on + strand at 2496.378 kb on - strand, within BPHYT_RS10980 at 2497.563 kb on + strand, within BPHYT_RS10985 at 2497.592 kb on - strand, within BPHYT_RS10985 at 2497.885 kb on + strand, within BPHYT_RS10985 at 2497.885 kb on + strand, within BPHYT_RS10985
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.01 mg/ml remove 2,495,160 - BPHYT_RS10975 0.21 -0.3 2,495,482 + -0.2 2,495,483 - +0.2 2,495,662 - +0.6 2,495,750 + +0.4 2,496,378 - BPHYT_RS10980 0.56 +0.5 2,497,563 + BPHYT_RS10985 0.46 -0.0 2,497,592 - BPHYT_RS10985 0.48 -0.1 2,497,885 + BPHYT_RS10985 0.71 +0.5 2,497,885 + BPHYT_RS10985 0.71 -0.2
Or see this region's nucleotide sequence