Experiment: Thallium(I) acetate 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS01820 and BPHYT_RS01825 are separated by 371 nucleotides BPHYT_RS01825 and BPHYT_RS01830 are separated by 113 nucleotides
BPHYT_RS01820: BPHYT_RS01820 - sugar ABC transporter ATP-binding protein, at 412,723 to 414,357
_RS01820
BPHYT_RS01825: BPHYT_RS01825 - sugar ABC transporter substrate-binding protein, at 414,729 to 415,748
_RS01825
BPHYT_RS01830: BPHYT_RS01830 - LacI family transcriptional regulator, at 415,862 to 416,914
_RS01830
Position (kb) 414
415
416 Strain fitness (log2 ratio) -1
0
1
2 at 414.063 kb on - strand, within BPHYT_RS01820 at 414.063 kb on - strand, within BPHYT_RS01820 at 414.241 kb on + strand at 414.242 kb on - strand at 414.318 kb on + strand at 414.473 kb on + strand at 414.474 kb on - strand at 414.483 kb on - strand at 414.609 kb on - strand at 414.609 kb on - strand at 414.609 kb on - strand at 414.667 kb on - strand at 414.699 kb on + strand at 414.739 kb on + strand at 414.773 kb on - strand at 415.294 kb on + strand, within BPHYT_RS01825 at 415.294 kb on + strand, within BPHYT_RS01825 at 415.295 kb on - strand, within BPHYT_RS01825 at 415.295 kb on - strand, within BPHYT_RS01825 at 415.416 kb on + strand, within BPHYT_RS01825 at 415.762 kb on - strand at 415.780 kb on - strand at 415.780 kb on - strand at 415.780 kb on - strand at 415.789 kb on + strand at 415.794 kb on + strand at 415.795 kb on - strand at 415.838 kb on + strand at 415.874 kb on - strand at 416.368 kb on + strand, within BPHYT_RS01830 at 416.368 kb on + strand, within BPHYT_RS01830 at 416.368 kb on + strand, within BPHYT_RS01830 at 416.369 kb on - strand, within BPHYT_RS01830 at 416.369 kb on - strand, within BPHYT_RS01830 at 416.369 kb on - strand, within BPHYT_RS01830 at 416.370 kb on + strand, within BPHYT_RS01830 at 416.370 kb on + strand, within BPHYT_RS01830 at 416.371 kb on - strand, within BPHYT_RS01830 at 416.371 kb on - strand, within BPHYT_RS01830 at 416.371 kb on - strand, within BPHYT_RS01830 at 416.371 kb on - strand, within BPHYT_RS01830 at 416.471 kb on - strand at 416.472 kb on + strand, within BPHYT_RS01830 at 416.472 kb on + strand, within BPHYT_RS01830 at 416.472 kb on + strand, within BPHYT_RS01830 at 416.491 kb on + strand, within BPHYT_RS01830 at 416.492 kb on - strand, within BPHYT_RS01830 at 416.536 kb on - strand, within BPHYT_RS01830 at 416.628 kb on + strand, within BPHYT_RS01830 at 416.628 kb on + strand, within BPHYT_RS01830 at 416.656 kb on - strand, within BPHYT_RS01830 at 416.724 kb on + strand, within BPHYT_RS01830 at 416.724 kb on + strand, within BPHYT_RS01830
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.01 mg/ml remove 414,063 - BPHYT_RS01820 0.82 -0.5 414,063 - BPHYT_RS01820 0.82 +1.4 414,241 + +0.1 414,242 - -0.5 414,318 + +0.6 414,473 + +0.1 414,474 - +0.1 414,483 - -1.0 414,609 - +1.3 414,609 - +0.2 414,609 - +0.2 414,667 - -0.1 414,699 + +0.0 414,739 + -0.1 414,773 - +0.1 415,294 + BPHYT_RS01825 0.55 +0.0 415,294 + BPHYT_RS01825 0.55 +0.4 415,295 - BPHYT_RS01825 0.55 +0.5 415,295 - BPHYT_RS01825 0.55 +0.4 415,416 + BPHYT_RS01825 0.67 +1.5 415,762 - +1.0 415,780 - -0.4 415,780 - -0.1 415,780 - -0.0 415,789 + -0.2 415,794 + -0.2 415,795 - +0.3 415,838 + -1.0 415,874 - -1.0 416,368 + BPHYT_RS01830 0.48 +1.2 416,368 + BPHYT_RS01830 0.48 +0.2 416,368 + BPHYT_RS01830 0.48 +0.0 416,369 - BPHYT_RS01830 0.48 +0.5 416,369 - BPHYT_RS01830 0.48 -0.6 416,369 - BPHYT_RS01830 0.48 -0.0 416,370 + BPHYT_RS01830 0.48 +0.2 416,370 + BPHYT_RS01830 0.48 +0.2 416,371 - BPHYT_RS01830 0.48 +0.0 416,371 - BPHYT_RS01830 0.48 -1.2 416,371 - BPHYT_RS01830 0.48 -0.4 416,371 - BPHYT_RS01830 0.48 -1.4 416,471 - +1.3 416,472 + BPHYT_RS01830 0.58 +0.1 416,472 + BPHYT_RS01830 0.58 +1.8 416,472 + BPHYT_RS01830 0.58 -0.4 416,491 + BPHYT_RS01830 0.60 +0.2 416,492 - BPHYT_RS01830 0.60 -0.9 416,536 - BPHYT_RS01830 0.64 +0.0 416,628 + BPHYT_RS01830 0.73 -0.1 416,628 + BPHYT_RS01830 0.73 +0.2 416,656 - BPHYT_RS01830 0.75 -0.2 416,724 + BPHYT_RS01830 0.82 -1.1 416,724 + BPHYT_RS01830 0.82 +0.1
Or see this region's nucleotide sequence