Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1370 and SMa1371 overlap by 4 nucleotides SMa1371 and SMa1374 are separated by 2 nucleotides SMa1374 and SMa1373 overlap by 1 nucleotides SMa1373 and SMa1375 are separated by 78 nucleotides
SMa1370: SMa1370 - ABC transporter ATP-binding protein, at 752,672 to 753,655
SMa1370
SMa1371: SMa1371 - ABC transporter ATP-binding protein, at 753,652 to 754,632
SMa1371
SMa1374: SMa1374 - ABC transporter permease, at 754,635 to 755,594
SMa1374
SMa1373: SMa1373 - ABC transporter permease, at 755,594 to 756,514
SMa1373
SMa1375: SMa1375 - ABC transporter substrate-binding protein, at 756,593 to 758,077
SMa1375
Position (kb) 754
755
756 Strain fitness (log2 ratio) -1
0
1 at 753.656 kb on - strand at 753.820 kb on + strand, within SMa1371 at 753.884 kb on + strand, within SMa1371 at 753.885 kb on - strand, within SMa1371 at 753.947 kb on + strand, within SMa1371 at 753.947 kb on + strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 753.948 kb on - strand, within SMa1371 at 754.072 kb on + strand, within SMa1371 at 754.073 kb on - strand, within SMa1371 at 754.817 kb on - strand, within SMa1374 at 754.817 kb on - strand, within SMa1374 at 754.887 kb on + strand, within SMa1374 at 755.023 kb on + strand, within SMa1374 at 755.071 kb on + strand, within SMa1374 at 755.157 kb on + strand, within SMa1374 at 755.157 kb on + strand, within SMa1374 at 755.157 kb on + strand, within SMa1374 at 755.157 kb on + strand, within SMa1374 at 755.157 kb on + strand, within SMa1374 at 755.158 kb on - strand, within SMa1374 at 755.346 kb on - strand, within SMa1374 at 755.434 kb on + strand, within SMa1374 at 755.435 kb on - strand, within SMa1374 at 755.435 kb on - strand, within SMa1374 at 755.819 kb on - strand, within SMa1373 at 755.819 kb on - strand, within SMa1373 at 755.846 kb on + strand, within SMa1373 at 755.851 kb on + strand, within SMa1373 at 755.852 kb on - strand, within SMa1373 at 755.866 kb on + strand, within SMa1373 at 755.866 kb on + strand, within SMa1373 at 755.907 kb on + strand, within SMa1373 at 755.907 kb on + strand, within SMa1373 at 755.907 kb on + strand, within SMa1373 at 755.908 kb on - strand, within SMa1373 at 755.983 kb on + strand, within SMa1373 at 755.984 kb on - strand, within SMa1373 at 756.514 kb on + strand at 756.514 kb on + strand at 756.514 kb on + strand at 756.514 kb on + strand at 756.515 kb on - strand at 756.515 kb on - strand at 756.573 kb on + strand at 756.574 kb on - strand at 756.574 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 753,656 - +0.4 753,820 + SMa1371 0.17 +0.5 753,884 + SMa1371 0.24 +0.7 753,885 - SMa1371 0.24 -0.4 753,947 + SMa1371 0.30 +0.5 753,947 + SMa1371 0.30 -0.6 753,948 - SMa1371 0.30 +0.6 753,948 - SMa1371 0.30 +0.3 753,948 - SMa1371 0.30 +0.5 753,948 - SMa1371 0.30 -0.1 753,948 - SMa1371 0.30 +0.2 753,948 - SMa1371 0.30 -0.4 754,072 + SMa1371 0.43 -0.5 754,073 - SMa1371 0.43 -0.7 754,817 - SMa1374 0.19 -1.2 754,817 - SMa1374 0.19 +0.0 754,887 + SMa1374 0.26 +0.2 755,023 + SMa1374 0.40 -0.3 755,071 + SMa1374 0.45 -1.0 755,157 + SMa1374 0.54 -0.2 755,157 + SMa1374 0.54 +0.2 755,157 + SMa1374 0.54 -0.4 755,157 + SMa1374 0.54 -0.3 755,157 + SMa1374 0.54 -0.5 755,158 - SMa1374 0.54 -0.3 755,346 - SMa1374 0.74 -0.3 755,434 + SMa1374 0.83 -1.5 755,435 - SMa1374 0.83 -0.3 755,435 - SMa1374 0.83 +0.2 755,819 - SMa1373 0.24 -0.3 755,819 - SMa1373 0.24 -0.7 755,846 + SMa1373 0.27 +1.5 755,851 + SMa1373 0.28 +0.8 755,852 - SMa1373 0.28 -0.5 755,866 + SMa1373 0.30 -0.9 755,866 + SMa1373 0.30 -0.5 755,907 + SMa1373 0.34 -0.1 755,907 + SMa1373 0.34 -0.1 755,907 + SMa1373 0.34 +0.0 755,908 - SMa1373 0.34 +0.1 755,983 + SMa1373 0.42 -0.5 755,984 - SMa1373 0.42 +0.7 756,514 + -0.2 756,514 + +0.7 756,514 + -0.6 756,514 + +0.2 756,515 - +1.1 756,515 - -0.1 756,573 + -0.5 756,574 - -0.3 756,574 - -0.0
Or see this region's nucleotide sequence