Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31405

Experiment: L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRR42_RS31400 and RR42_RS31405 are separated by 387 nucleotides RR42_RS31400: RR42_RS31400 - GntR family transcriptional regulator, at 2,421,012 to 2,421,890 _RS31400 RR42_RS31405: RR42_RS31405 - hypothetical protein, at 2,422,278 to 2,422,463 _RS31405 Position (kb) 2422 2423Strain fitness (log2 ratio) -2 -1 0 1 2at 2421.536 kb on - strand, within RR42_RS31400at 2421.832 kb on + strandat 2421.832 kb on + strandat 2421.832 kb on + strandat 2421.833 kb on - strandat 2421.833 kb on - strandat 2421.833 kb on - strandat 2421.833 kb on - strandat 2421.853 kb on + strandat 2421.857 kb on + strandat 2421.857 kb on + strandat 2421.858 kb on - strandat 2421.937 kb on - strandat 2422.026 kb on - strandat 2422.147 kb on + strandat 2422.193 kb on + strandat 2422.194 kb on - strandat 2422.194 kb on - strandat 2422.194 kb on - strandat 2422.194 kb on - strandat 2422.195 kb on + strandat 2422.195 kb on + strandat 2422.196 kb on - strandat 2422.197 kb on + strandat 2422.198 kb on - strandat 2422.198 kb on - strandat 2422.198 kb on - strandat 2422.198 kb on - strandat 2422.198 kb on - strandat 2422.224 kb on - strandat 2422.224 kb on - strandat 2422.512 kb on - strandat 2422.546 kb on + strandat 2422.550 kb on - strandat 2422.550 kb on - strandat 2422.550 kb on - strandat 2422.550 kb on - strandat 2422.554 kb on - strandat 2422.554 kb on - strandat 2422.585 kb on + strandat 2422.586 kb on - strandat 2422.586 kb on - strandat 2422.641 kb on - strandat 2422.690 kb on + strandat 2422.691 kb on - strandat 2422.717 kb on - strandat 2422.755 kb on + strandat 2422.756 kb on - strandat 2422.756 kb on - strandat 2422.760 kb on + strandat 2422.761 kb on - strandat 2422.761 kb on - strandat 2422.777 kb on + strandat 2422.778 kb on - strandat 2422.874 kb on - strandat 2422.919 kb on + strandat 2422.931 kb on - strandat 2423.030 kb on + strandat 2423.031 kb on - strandat 2423.031 kb on - strandat 2423.040 kb on - strandat 2423.168 kb on + strandat 2423.168 kb on + strandat 2423.168 kb on + strandat 2423.169 kb on - strandat 2423.235 kb on + strandat 2423.236 kb on - strandat 2423.383 kb on - strandat 2423.383 kb on - strandat 2423.383 kb on - strandat 2423.411 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lactate (C)
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2,421,536 - RR42_RS31400 0.60 -0.6
2,421,832 + -0.0
2,421,832 + +1.4
2,421,832 + +0.7
2,421,833 - -2.6
2,421,833 - -0.2
2,421,833 - -0.3
2,421,833 - -0.9
2,421,853 + +0.5
2,421,857 + +0.5
2,421,857 + +0.1
2,421,858 - +0.7
2,421,937 - -0.3
2,422,026 - +0.1
2,422,147 + -0.4
2,422,193 + +0.6
2,422,194 - -0.3
2,422,194 - -1.5
2,422,194 - -0.6
2,422,194 - -0.6
2,422,195 + +0.4
2,422,195 + -0.7
2,422,196 - -0.1
2,422,197 + +0.2
2,422,198 - +0.1
2,422,198 - +0.4
2,422,198 - -0.6
2,422,198 - -0.8
2,422,198 - +0.5
2,422,224 - -0.3
2,422,224 - +0.1
2,422,512 - -0.6
2,422,546 + -1.5
2,422,550 - -0.5
2,422,550 - +1.1
2,422,550 - -1.3
2,422,550 - -0.2
2,422,554 - -1.1
2,422,554 - +0.3
2,422,585 + -0.2
2,422,586 - +0.7
2,422,586 - -0.3
2,422,641 - -0.5
2,422,690 + -0.2
2,422,691 - +0.1
2,422,717 - +0.9
2,422,755 + -0.6
2,422,756 - +1.1
2,422,756 - +0.1
2,422,760 + +0.4
2,422,761 - +0.1
2,422,761 - +0.2
2,422,777 + +1.3
2,422,778 - -1.9
2,422,874 - +0.4
2,422,919 + +0.0
2,422,931 - +0.3
2,423,030 + +1.2
2,423,031 - +1.0
2,423,031 - -1.6
2,423,040 - +2.3
2,423,168 + -0.4
2,423,168 + +0.5
2,423,168 + -0.1
2,423,169 - +0.7
2,423,235 + -0.3
2,423,236 - -1.3
2,423,383 - +0.3
2,423,383 - -0.7
2,423,383 - +1.1
2,423,411 - -0.3

Or see this region's nucleotide sequence