Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5736 and Pf6N2E2_5737 are separated by 449 nucleotides Pf6N2E2_5737 and Pf6N2E2_5738 are separated by 11 nucleotides
Pf6N2E2_5736 - FIG00961250: hypothetical protein, at 6,553,214 to 6,553,798
_5736
Pf6N2E2_5737 - Cob(I)alamin adenosyltransferase (EC 2.5.1.17), at 6,554,248 to 6,554,859
_5737
Pf6N2E2_5738 - Cobyrinic acid A,C-diamide synthase, at 6,554,871 to 6,556,187
_5738
Position (kb)
6554
6555 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6553.257 kb on + strand at 6553.257 kb on + strand at 6553.257 kb on + strand at 6553.258 kb on - strand at 6553.258 kb on - strand at 6553.258 kb on - strand at 6553.258 kb on - strand at 6553.302 kb on + strand, within Pf6N2E2_5736 at 6553.302 kb on + strand, within Pf6N2E2_5736 at 6553.302 kb on + strand, within Pf6N2E2_5736 at 6553.302 kb on + strand, within Pf6N2E2_5736 at 6553.303 kb on - strand, within Pf6N2E2_5736 at 6553.303 kb on - strand, within Pf6N2E2_5736 at 6553.303 kb on - strand, within Pf6N2E2_5736 at 6553.431 kb on + strand, within Pf6N2E2_5736 at 6553.432 kb on - strand, within Pf6N2E2_5736 at 6553.432 kb on - strand, within Pf6N2E2_5736 at 6553.683 kb on + strand, within Pf6N2E2_5736 at 6553.727 kb on - strand, within Pf6N2E2_5736 at 6553.727 kb on - strand, within Pf6N2E2_5736 at 6553.798 kb on + strand at 6553.798 kb on + strand at 6553.798 kb on + strand at 6553.798 kb on + strand at 6553.798 kb on + strand at 6553.798 kb on + strand at 6553.798 kb on + strand at 6553.799 kb on - strand at 6553.799 kb on - strand at 6553.799 kb on - strand at 6553.799 kb on - strand at 6553.799 kb on - strand at 6553.799 kb on - strand at 6553.799 kb on - strand at 6553.799 kb on - strand at 6553.799 kb on - strand at 6553.799 kb on - strand at 6553.799 kb on - strand at 6553.799 kb on - strand at 6553.901 kb on + strand at 6553.902 kb on - strand at 6553.928 kb on + strand at 6553.929 kb on - strand at 6554.055 kb on + strand at 6554.055 kb on + strand at 6554.056 kb on - strand at 6554.056 kb on - strand at 6554.056 kb on - strand at 6554.056 kb on - strand at 6554.074 kb on + strand at 6554.075 kb on - strand at 6554.075 kb on - strand at 6554.677 kb on + strand, within Pf6N2E2_5737 at 6554.983 kb on + strand at 6555.054 kb on + strand, within Pf6N2E2_5738 at 6555.054 kb on + strand, within Pf6N2E2_5738 at 6555.055 kb on - strand, within Pf6N2E2_5738 at 6555.055 kb on - strand, within Pf6N2E2_5738 at 6555.624 kb on + strand, within Pf6N2E2_5738 at 6555.624 kb on + strand, within Pf6N2E2_5738 at 6555.625 kb on - strand, within Pf6N2E2_5738 at 6555.625 kb on - strand, within Pf6N2E2_5738 at 6555.625 kb on - strand, within Pf6N2E2_5738 at 6555.721 kb on - strand, within Pf6N2E2_5738 at 6555.839 kb on + strand, within Pf6N2E2_5738 at 6555.846 kb on + strand, within Pf6N2E2_5738 at 6555.846 kb on + strand, within Pf6N2E2_5738 at 6555.846 kb on + strand, within Pf6N2E2_5738 at 6555.847 kb on - strand, within Pf6N2E2_5738 at 6555.847 kb on - strand, within Pf6N2E2_5738 at 6555.847 kb on - strand, within Pf6N2E2_5738
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 6,553,257 + +0.1 6,553,257 + +1.6 6,553,257 + +0.8 6,553,258 - +0.6 6,553,258 - +1.8 6,553,258 - +0.5 6,553,258 - +1.1 6,553,302 + Pf6N2E2_5736 0.15 -0.3 6,553,302 + Pf6N2E2_5736 0.15 -0.2 6,553,302 + Pf6N2E2_5736 0.15 +0.0 6,553,302 + Pf6N2E2_5736 0.15 +0.1 6,553,303 - Pf6N2E2_5736 0.15 +0.4 6,553,303 - Pf6N2E2_5736 0.15 +0.6 6,553,303 - Pf6N2E2_5736 0.15 +0.7 6,553,431 + Pf6N2E2_5736 0.37 +0.8 6,553,432 - Pf6N2E2_5736 0.37 -1.2 6,553,432 - Pf6N2E2_5736 0.37 -0.1 6,553,683 + Pf6N2E2_5736 0.80 +0.4 6,553,727 - Pf6N2E2_5736 0.88 -0.2 6,553,727 - Pf6N2E2_5736 0.88 -0.4 6,553,798 + +0.7 6,553,798 + +0.7 6,553,798 + -0.4 6,553,798 + -0.9 6,553,798 + +0.4 6,553,798 + +1.2 6,553,798 + +0.5 6,553,799 - -0.8 6,553,799 - -0.2 6,553,799 - +0.5 6,553,799 - +0.3 6,553,799 - +0.5 6,553,799 - +0.8 6,553,799 - +0.2 6,553,799 - +0.7 6,553,799 - +0.1 6,553,799 - -1.2 6,553,799 - -0.6 6,553,799 - -0.0 6,553,901 + +1.0 6,553,902 - -0.3 6,553,928 + +1.3 6,553,929 - +0.2 6,554,055 + +0.1 6,554,055 + -0.0 6,554,056 - -0.6 6,554,056 - -0.5 6,554,056 - -0.7 6,554,056 - +0.8 6,554,074 + +0.1 6,554,075 - +1.0 6,554,075 - -0.1 6,554,677 + Pf6N2E2_5737 0.70 -0.9 6,554,983 + -1.6 6,555,054 + Pf6N2E2_5738 0.14 -0.6 6,555,054 + Pf6N2E2_5738 0.14 -0.4 6,555,055 - Pf6N2E2_5738 0.14 +0.8 6,555,055 - Pf6N2E2_5738 0.14 -0.5 6,555,624 + Pf6N2E2_5738 0.57 -3.1 6,555,624 + Pf6N2E2_5738 0.57 -0.6 6,555,625 - Pf6N2E2_5738 0.57 -0.8 6,555,625 - Pf6N2E2_5738 0.57 -0.9 6,555,625 - Pf6N2E2_5738 0.57 -0.2 6,555,721 - Pf6N2E2_5738 0.65 -0.2 6,555,839 + Pf6N2E2_5738 0.74 -0.7 6,555,846 + Pf6N2E2_5738 0.74 -1.0 6,555,846 + Pf6N2E2_5738 0.74 -0.1 6,555,846 + Pf6N2E2_5738 0.74 -0.4 6,555,847 - Pf6N2E2_5738 0.74 -0.8 6,555,847 - Pf6N2E2_5738 0.74 +0.9 6,555,847 - Pf6N2E2_5738 0.74 +0.2
Or see this region's nucleotide sequence