Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3655

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
4,254,881	-				+0.5
4,254,906	-				-0.2
4,254,906	-				+0.2
4,254,906	-				+0.9
4,254,906	-				+0.3
4,254,906	-				+0.1
4,255,046	+		Pf6N2E2_3654	0.20	+0.5
4,255,047	-		Pf6N2E2_3654	0.21	+0.8
4,255,100	+		Pf6N2E2_3654	0.32	+0.5
4,255,151	+		Pf6N2E2_3654	0.43	+0.3
4,255,151	+		Pf6N2E2_3654	0.43	-0.0
4,255,151	+		Pf6N2E2_3654	0.43	-1.1
4,255,152	-		Pf6N2E2_3654	0.43	-0.4
4,255,152	-		Pf6N2E2_3654	0.43	+0.3
4,255,330	+		Pf6N2E2_3654	0.82	+0.7
4,255,330	+		Pf6N2E2_3654	0.82	-0.4
4,255,330	+		Pf6N2E2_3654	0.82	+0.7
4,255,330	+		Pf6N2E2_3654	0.82	-0.4
4,255,331	-		Pf6N2E2_3654	0.82	+0.3
4,255,331	-		Pf6N2E2_3654	0.82	+0.2
4,255,378	+				+0.5
4,255,379	-				+0.4
4,255,452	+				+1.2
4,255,453	-				+0.2
4,255,453	-				+0.4
4,255,453	-				+0.5
4,255,521	+				-0.1
4,255,540	+				+1.0
4,255,624	+				-0.7
4,255,624	+				-1.7
4,255,626	+				+0.2
4,255,634	+				+0.8
4,255,653	+				+0.3
4,255,653	+				+0.2
4,255,654	-				-1.2
4,255,654	-				-0.5
4,255,866	-		Pf6N2E2_3655	0.13	-0.2
4,255,916	+				+0.7
4,256,016	+		Pf6N2E2_3655	0.24	-0.9
4,256,017	-		Pf6N2E2_3655	0.24	+0.5
4,256,017	-		Pf6N2E2_3655	0.24	-0.1
4,256,017	-		Pf6N2E2_3655	0.24	-0.7
4,256,017	-		Pf6N2E2_3655	0.24	-0.0
4,256,029	+		Pf6N2E2_3655	0.25	-1.0
4,256,044	+		Pf6N2E2_3655	0.26	-2.1
4,256,045	-		Pf6N2E2_3655	0.26	-0.7
4,256,045	-		Pf6N2E2_3655	0.26	-0.7
4,256,160	-		Pf6N2E2_3655	0.34	+0.3
4,256,160	-		Pf6N2E2_3655	0.34	-0.3
4,256,248	+		Pf6N2E2_3655	0.40	+0.5
4,256,249	-		Pf6N2E2_3655	0.40	-0.9
4,256,249	-		Pf6N2E2_3655	0.40	+0.0
4,256,255	-		Pf6N2E2_3655	0.40	-0.3
4,256,322	+		Pf6N2E2_3655	0.45	+1.7
4,256,322	+		Pf6N2E2_3655	0.45	-0.1
4,256,322	+		Pf6N2E2_3655	0.45	-0.0
4,256,322	+		Pf6N2E2_3655	0.45	+0.0
4,256,322	+		Pf6N2E2_3655	0.45	+0.0
4,256,323	-		Pf6N2E2_3655	0.45	-0.4
4,256,323	-		Pf6N2E2_3655	0.45	-0.6
4,256,323	-		Pf6N2E2_3655	0.45	-0.5
4,256,325	+		Pf6N2E2_3655	0.45	+0.2
4,256,448	+		Pf6N2E2_3655	0.54	-1.1
4,256,449	-		Pf6N2E2_3655	0.54	+0.4
4,256,449	-		Pf6N2E2_3655	0.54	-1.1
4,256,453	-		Pf6N2E2_3655	0.54	-1.6
4,256,489	-		Pf6N2E2_3655	0.57	+0.3
4,256,510	-		Pf6N2E2_3655	0.58	-0.5
4,256,511	+		Pf6N2E2_3655	0.59	-0.5
4,256,512	-		Pf6N2E2_3655	0.59	-2.3
4,256,512	-		Pf6N2E2_3655	0.59	-0.1
4,256,512	-		Pf6N2E2_3655	0.59	-0.2
4,256,512	-		Pf6N2E2_3655	0.59	-1.2
4,256,560	+		Pf6N2E2_3655	0.62	-0.4
4,256,560	+		Pf6N2E2_3655	0.62	+0.3
4,256,747	+		Pf6N2E2_3655	0.75	-1.4
4,256,748	-		Pf6N2E2_3655	0.75	-0.4
4,256,748	-		Pf6N2E2_3655	0.75	-0.5
4,256,896	-		Pf6N2E2_3655	0.86	-0.9
4,256,896	-		Pf6N2E2_3655	0.86	-0.3
4,256,901	+		Pf6N2E2_3655	0.86	-0.5
4,256,901	+		Pf6N2E2_3655	0.86	-0.6
4,256,919	+		Pf6N2E2_3655	0.87	-1.5
4,256,919	+		Pf6N2E2_3655	0.87	-0.2
4,256,919	+		Pf6N2E2_3655	0.87	-1.1
4,256,919	+		Pf6N2E2_3655	0.87	-2.2
4,256,920	-		Pf6N2E2_3655	0.87	+1.2
4,256,920	-		Pf6N2E2_3655	0.87	+0.0
4,256,920	-		Pf6N2E2_3655	0.87	-0.8
4,256,920	-		Pf6N2E2_3655	0.87	-0.6
4,256,920	-		Pf6N2E2_3655	0.87	-1.1
4,256,920	-		Pf6N2E2_3655	0.87	-0.1
4,257,042	-				-0.5
4,257,124	+				-0.3
4,257,124	+				-2.5
4,257,157	+				+0.8
4,257,157	+				-1.2
4,257,301	+		Pf6N2E2_3656	0.21	+0.5
4,257,301	+		Pf6N2E2_3656	0.21	+1.3
4,257,301	+		Pf6N2E2_3656	0.21	-1.1
4,257,301	+		Pf6N2E2_3656	0.21	-0.4
4,257,301	+		Pf6N2E2_3656	0.21	+0.6
4,257,373	+		Pf6N2E2_3656	0.29	-1.5
4,257,478	+		Pf6N2E2_3656	0.40	-0.4
4,257,478	+		Pf6N2E2_3656	0.40	-0.1
4,257,478	+		Pf6N2E2_3656	0.40	-2.8
4,257,478	+		Pf6N2E2_3656	0.40	+0.6
4,257,478	+		Pf6N2E2_3656	0.40	-1.6
4,257,478	+		Pf6N2E2_3656	0.40	-0.2
4,257,515	+		Pf6N2E2_3656	0.45	-1.2
4,257,515	+		Pf6N2E2_3656	0.45	-0.7
4,257,515	+		Pf6N2E2_3656	0.45	-1.7
4,257,584	+		Pf6N2E2_3656	0.52	-0.7
4,257,584	+		Pf6N2E2_3656	0.52	-2.6
4,257,589	+		Pf6N2E2_3656	0.53	-0.5
4,257,589	+		Pf6N2E2_3656	0.53	-1.5
4,257,673	+		Pf6N2E2_3656	0.62	-1.1
4,257,673	+		Pf6N2E2_3656	0.62	-1.1
4,257,673	+		Pf6N2E2_3656	0.62	-0.5
4,257,673	+				+1.8
4,257,673	+		Pf6N2E2_3656	0.62	-0.4
4,257,673	+		Pf6N2E2_3656	0.62	-0.6
4,257,856	+		Pf6N2E2_3656	0.82	-1.1
4,257,949	+				-3.6