Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2250

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
2,663,813	-		Pf6N2E2_2249	0.44	-1.0
2,663,857	+		Pf6N2E2_2249	0.48	+0.1
2,663,858	-		Pf6N2E2_2249	0.48	+0.4
2,663,858	-		Pf6N2E2_2249	0.48	-0.4
2,663,858	-		Pf6N2E2_2249	0.48	+1.6
2,663,882	-		Pf6N2E2_2249	0.50	+0.3
2,663,912	+		Pf6N2E2_2249	0.52	+0.6
2,663,938	-		Pf6N2E2_2249	0.54	-1.8
2,663,965	+		Pf6N2E2_2249	0.56	-0.7
2,663,965	+		Pf6N2E2_2249	0.56	-0.7
2,663,966	-		Pf6N2E2_2249	0.56	-0.9
2,664,335	+		Pf6N2E2_2249	0.85	+0.5
2,664,336	-		Pf6N2E2_2249	0.86	-0.1
2,664,345	-		Pf6N2E2_2249	0.86	+0.2
2,664,413	+				+0.0
2,664,413	+				-1.0
2,664,413	+				-0.6
2,664,414	-				+0.0
2,664,433	+				-0.5
2,664,498	+				+1.0
2,664,499	-				-0.8
2,664,539	+				+0.4
2,664,539	+				+0.8
2,664,540	-				-0.4
2,664,540	-				+0.4
2,664,540	-				-0.5
2,664,567	+				+0.6
2,664,568	-				-0.2
2,664,585	+				-0.3
2,664,585	+				+0.0
2,664,585	+				+0.3
2,664,604	+				+0.3
2,664,604	+				-0.6
2,664,604	+				-1.0
2,664,605	-				+0.1
2,664,605	-				+0.7
2,664,662	+				-3.1
2,664,662	+				-0.9
2,664,683	-				-0.2
2,664,892	+		Pf6N2E2_2250	0.16	-0.9
2,664,893	-		Pf6N2E2_2250	0.17	-1.7
2,664,893	-		Pf6N2E2_2250	0.17	-0.6
2,664,959	+		Pf6N2E2_2250	0.24	+0.2
2,665,119	+		Pf6N2E2_2250	0.40	-0.3
2,665,174	+		Pf6N2E2_2250	0.46	+0.0
2,665,175	-		Pf6N2E2_2250	0.46	+0.0
2,665,334	-		Pf6N2E2_2250	0.63	-0.8
2,665,415	-		Pf6N2E2_2250	0.72	-0.1
2,665,436	+		Pf6N2E2_2250	0.74	-0.5
2,665,437	-		Pf6N2E2_2250	0.74	-0.0
2,665,437	-		Pf6N2E2_2250	0.74	-0.2
2,665,437	-		Pf6N2E2_2250	0.74	-0.8
2,665,437	-		Pf6N2E2_2250	0.74	+0.1
2,665,571	-		Pf6N2E2_2250	0.88	-0.3
2,665,605	+				+0.2
2,665,606	-				-2.3
2,665,606	-				+0.2
2,665,695	+				-0.6
2,665,731	+				-2.8
2,665,731	+				-1.4
2,665,732	-				-2.4
2,665,754	+				-1.1
2,665,754	+				-1.6
2,665,754	+				-1.4
2,665,754	+				-0.5
2,665,755	-				+0.4
2,665,755	-				-1.9
2,665,755	-				-0.8
2,665,755	-				-2.5
2,665,755	-				-0.8
2,665,767	+				-0.7
2,665,767	+				-1.5
2,665,767	+				-0.8
2,665,767	+				-0.9
2,665,767	+				-1.5
2,665,767	+				-1.6
2,665,767	+				-1.8
2,665,767	+				-1.2
2,665,767	+				+0.4
2,665,767	+				-2.6
2,665,767	+				-0.2
2,665,767	+				-3.1
2,665,767	+				-1.4
2,665,768	-				-1.2
2,665,768	-				-0.3
2,665,768	-				-0.9
2,665,768	-				-1.1
2,665,768	-				-0.6
2,665,768	-				-3.0
2,665,768	-				+0.3
2,665,946	-		Pf6N2E2_2251	0.28	-0.5
2,666,249	-		Pf6N2E2_2251	0.63	-1.6
2,666,307	+		Pf6N2E2_2251	0.69	-0.8
2,666,308	-		Pf6N2E2_2251	0.69	-1.6
2,666,346	+		Pf6N2E2_2251	0.74	-1.5
2,666,347	-		Pf6N2E2_2251	0.74	-2.4
2,666,347	-		Pf6N2E2_2251	0.74	-1.5
2,666,347	-		Pf6N2E2_2251	0.74	-1.7
2,666,409	-		Pf6N2E2_2251	0.81	+0.2
2,666,409	-		Pf6N2E2_2251	0.81	-2.1
2,666,526	+				-1.4
2,666,527	-				+0.2
2,666,527	-				-1.0
2,666,527	-				-1.6
2,666,588	-				-2.7
2,666,588	-				-0.2
2,666,593	+				-2.9
2,666,593	+				-2.1
2,666,593	+				-0.4
2,666,593	+				-2.8
2,666,594	-				+1.0
2,666,594	-				-1.1
2,666,594	-				-0.1
2,666,594	-				-2.2
2,666,676	+		Pf6N2E2_2252	0.31	-1.9
2,666,677	-		Pf6N2E2_2252	0.32	-0.2
2,666,677	-		Pf6N2E2_2252	0.32	+0.3
2,666,677	-		Pf6N2E2_2252	0.32	-1.8
2,666,677	-		Pf6N2E2_2252	0.32	-0.4
2,666,677	-		Pf6N2E2_2252	0.32	-1.0
2,666,677	-		Pf6N2E2_2252	0.32	-1.2
2,666,677	-		Pf6N2E2_2252	0.32	-1.7