Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_5436 and Pf1N1B4_5437 are separated by 778 nucleotides
Pf1N1B4_5436 - Probable helicase, at 176,691 to 178,637
_5436
Pf1N1B4_5437 - hypothetical protein, at 179,416 to 179,595
_5437
Position (kb) 179
180 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 178.456 kb on + strand at 178.457 kb on - strand at 178.457 kb on - strand at 178.457 kb on - strand at 178.529 kb on + strand at 178.557 kb on + strand at 178.557 kb on + strand at 178.558 kb on - strand at 178.558 kb on - strand at 178.592 kb on + strand at 178.627 kb on + strand at 178.627 kb on + strand at 178.627 kb on + strand at 178.627 kb on + strand at 178.628 kb on - strand at 178.721 kb on + strand at 178.771 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.775 kb on + strand at 178.776 kb on - strand at 178.776 kb on - strand at 178.776 kb on - strand at 178.776 kb on - strand at 178.776 kb on - strand at 178.776 kb on - strand at 178.776 kb on - strand at 178.779 kb on + strand at 178.779 kb on + strand at 178.779 kb on + strand at 178.779 kb on + strand at 178.831 kb on + strand at 178.831 kb on + strand at 178.831 kb on + strand at 178.855 kb on + strand at 178.895 kb on + strand at 178.895 kb on + strand at 178.895 kb on + strand at 178.896 kb on - strand at 178.896 kb on - strand at 178.899 kb on + strand at 178.899 kb on + strand at 178.900 kb on - strand at 178.902 kb on + strand at 178.902 kb on + strand at 178.902 kb on + strand at 178.903 kb on - strand at 178.903 kb on - strand at 178.975 kb on + strand at 178.988 kb on + strand at 178.988 kb on + strand at 179.040 kb on + strand at 179.040 kb on + strand at 179.040 kb on + strand at 179.041 kb on - strand at 179.041 kb on - strand at 179.123 kb on + strand at 179.129 kb on + strand at 179.129 kb on + strand at 179.183 kb on - strand at 179.236 kb on + strand at 179.270 kb on - strand at 179.270 kb on - strand at 179.273 kb on + strand at 179.274 kb on - strand at 179.314 kb on + strand at 179.338 kb on - strand at 179.355 kb on - strand at 179.394 kb on + strand at 179.443 kb on + strand, within Pf1N1B4_5437 at 179.521 kb on + strand at 179.521 kb on + strand, within Pf1N1B4_5437 at 179.521 kb on + strand, within Pf1N1B4_5437 at 179.521 kb on + strand, within Pf1N1B4_5437 at 179.521 kb on + strand, within Pf1N1B4_5437 at 179.521 kb on + strand, within Pf1N1B4_5437 at 179.521 kb on + strand, within Pf1N1B4_5437 at 179.522 kb on - strand, within Pf1N1B4_5437 at 179.538 kb on + strand, within Pf1N1B4_5437 at 179.538 kb on + strand, within Pf1N1B4_5437 at 179.538 kb on + strand, within Pf1N1B4_5437 at 179.538 kb on + strand, within Pf1N1B4_5437 at 179.538 kb on + strand, within Pf1N1B4_5437 at 179.539 kb on - strand, within Pf1N1B4_5437 at 179.539 kb on - strand, within Pf1N1B4_5437 at 179.539 kb on - strand, within Pf1N1B4_5437 at 179.557 kb on - strand, within Pf1N1B4_5437 at 179.593 kb on + strand at 179.593 kb on + strand at 179.593 kb on + strand at 179.594 kb on - strand at 179.601 kb on + strand at 179.602 kb on - strand at 179.648 kb on + strand at 179.648 kb on + strand at 179.721 kb on + strand at 179.722 kb on - strand at 179.857 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.896 kb on + strand at 179.897 kb on - strand at 179.897 kb on - strand at 179.897 kb on - strand at 179.897 kb on - strand at 179.898 kb on + strand at 179.970 kb on + strand at 180.042 kb on - strand at 180.071 kb on - strand at 180.199 kb on + strand at 180.199 kb on + strand at 180.206 kb on - strand at 180.206 kb on - strand at 180.332 kb on + strand at 180.333 kb on - strand at 180.375 kb on + strand at 180.376 kb on - strand at 180.414 kb on + strand at 180.414 kb on + strand at 180.415 kb on - strand at 180.453 kb on + strand at 180.453 kb on + strand at 180.453 kb on + strand at 180.453 kb on + strand at 180.453 kb on + strand at 180.512 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 178,456 + +1.1 178,457 - -0.6 178,457 - -0.6 178,457 - -1.0 178,529 + +1.3 178,557 + -0.7 178,557 + +0.6 178,558 - +1.0 178,558 - +0.2 178,592 + +0.4 178,627 + -0.0 178,627 + -0.5 178,627 + +2.6 178,627 + -0.0 178,628 - +0.8 178,721 + +2.0 178,771 + -0.0 178,775 + +0.4 178,775 + -0.3 178,775 + +1.4 178,775 + +1.0 178,775 + +0.1 178,775 + +1.2 178,775 + +1.5 178,775 + -0.6 178,775 + +0.4 178,775 + +0.8 178,775 + -0.8 178,775 + +0.7 178,775 + -0.7 178,775 + +1.6 178,775 + -0.6 178,775 + +0.1 178,775 + +1.3 178,775 + +2.0 178,775 + +0.7 178,776 - -1.1 178,776 - -1.0 178,776 - +2.6 178,776 - +1.0 178,776 - +0.2 178,776 - +0.2 178,776 - -0.0 178,779 + -1.2 178,779 + +0.8 178,779 + -0.1 178,779 + -0.6 178,831 + -0.0 178,831 + +0.7 178,831 + +0.4 178,855 + -0.2 178,895 + +0.2 178,895 + +1.6 178,895 + -0.0 178,896 - +2.0 178,896 - -1.0 178,899 + +0.4 178,899 + +2.0 178,900 - +0.3 178,902 + +2.4 178,902 + +0.2 178,902 + +0.4 178,903 - -0.2 178,903 - +2.0 178,975 + -0.8 178,988 + -0.2 178,988 + -0.6 179,040 + -0.3 179,040 + -1.3 179,040 + -0.4 179,041 - +0.7 179,041 - -0.0 179,123 + +1.0 179,129 + +0.2 179,129 + +1.2 179,183 - +0.2 179,236 + +4.0 179,270 - +1.4 179,270 - +0.3 179,273 + -0.9 179,274 - +2.0 179,314 + +0.4 179,338 - +0.1 179,355 - +0.6 179,394 + -0.3 179,443 + Pf1N1B4_5437 0.15 -0.3 179,521 + +2.0 179,521 + Pf1N1B4_5437 0.58 -0.6 179,521 + Pf1N1B4_5437 0.58 -1.0 179,521 + Pf1N1B4_5437 0.58 +1.0 179,521 + Pf1N1B4_5437 0.58 -0.2 179,521 + Pf1N1B4_5437 0.58 +1.0 179,521 + Pf1N1B4_5437 0.58 +1.2 179,522 - Pf1N1B4_5437 0.59 -1.4 179,538 + Pf1N1B4_5437 0.68 -0.2 179,538 + Pf1N1B4_5437 0.68 -0.8 179,538 + Pf1N1B4_5437 0.68 -1.0 179,538 + Pf1N1B4_5437 0.68 -1.0 179,538 + Pf1N1B4_5437 0.68 +0.8 179,539 - Pf1N1B4_5437 0.68 -0.6 179,539 - Pf1N1B4_5437 0.68 -2.4 179,539 - Pf1N1B4_5437 0.68 -0.2 179,557 - Pf1N1B4_5437 0.78 -0.0 179,593 + -0.3 179,593 + +0.0 179,593 + +1.4 179,594 - -0.3 179,601 + +0.3 179,602 - +0.2 179,648 + -0.4 179,648 + +1.4 179,721 + +1.7 179,722 - +1.3 179,857 + -0.0 179,896 + +3.0 179,896 + -0.3 179,896 + -1.0 179,896 + -0.3 179,896 + -0.3 179,896 + -0.6 179,896 + +2.0 179,896 + +0.5 179,896 + -0.4 179,896 + -0.3 179,896 + +0.8 179,896 + +0.4 179,896 + +0.1 179,896 + -0.6 179,896 + +0.8 179,896 + +0.7 179,896 + -0.2 179,896 + +2.6 179,896 + -0.6 179,897 - -0.4 179,897 - +1.0 179,897 - +0.4 179,897 - +0.2 179,898 + +0.1 179,970 + -0.8 180,042 - -0.9 180,071 - +0.4 180,199 + -0.6 180,199 + +2.0 180,206 - +0.6 180,206 - +0.9 180,332 + -0.3 180,333 - +1.4 180,375 + +1.4 180,376 - +0.8 180,414 + +1.4 180,414 + +2.0 180,415 - +1.6 180,453 + +0.4 180,453 + +0.8 180,453 + +1.5 180,453 + -0.2 180,453 + -0.3 180,512 + +0.4
Or see this region's nucleotide sequence