Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_428 and Pf1N1B4_429 are separated by 210 nucleotides Pf1N1B4_429 and Pf1N1B4_430 are separated by 666 nucleotides
Pf1N1B4_428 - Unknown, at 497,898 to 499,193
_428
Pf1N1B4_429 - FIG00964214: hypothetical protein, at 499,404 to 499,703
_429
Pf1N1B4_430 - hypothetical protein, at 500,370 to 500,486
_430
Position (kb) 499
500 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 498.478 kb on + strand at 498.587 kb on + strand, within Pf1N1B4_428 at 498.587 kb on + strand, within Pf1N1B4_428 at 498.610 kb on - strand, within Pf1N1B4_428 at 498.635 kb on + strand, within Pf1N1B4_428 at 498.645 kb on + strand, within Pf1N1B4_428 at 498.646 kb on - strand at 498.646 kb on - strand, within Pf1N1B4_428 at 498.726 kb on + strand, within Pf1N1B4_428 at 498.726 kb on + strand, within Pf1N1B4_428 at 498.727 kb on - strand, within Pf1N1B4_428 at 498.727 kb on - strand, within Pf1N1B4_428 at 498.728 kb on + strand at 498.728 kb on + strand, within Pf1N1B4_428 at 498.728 kb on + strand, within Pf1N1B4_428 at 498.728 kb on + strand, within Pf1N1B4_428 at 498.729 kb on - strand, within Pf1N1B4_428 at 498.729 kb on - strand at 498.729 kb on - strand, within Pf1N1B4_428 at 498.729 kb on - strand, within Pf1N1B4_428 at 498.742 kb on - strand, within Pf1N1B4_428 at 498.742 kb on - strand, within Pf1N1B4_428 at 498.762 kb on + strand, within Pf1N1B4_428 at 498.762 kb on + strand, within Pf1N1B4_428 at 498.762 kb on + strand, within Pf1N1B4_428 at 498.762 kb on + strand, within Pf1N1B4_428 at 498.763 kb on - strand, within Pf1N1B4_428 at 498.763 kb on - strand, within Pf1N1B4_428 at 498.774 kb on + strand, within Pf1N1B4_428 at 498.775 kb on - strand, within Pf1N1B4_428 at 498.775 kb on - strand, within Pf1N1B4_428 at 498.830 kb on + strand, within Pf1N1B4_428 at 498.918 kb on + strand, within Pf1N1B4_428 at 498.918 kb on + strand at 498.948 kb on + strand, within Pf1N1B4_428 at 498.948 kb on + strand, within Pf1N1B4_428 at 499.049 kb on + strand, within Pf1N1B4_428 at 499.049 kb on + strand, within Pf1N1B4_428 at 499.049 kb on + strand, within Pf1N1B4_428 at 499.049 kb on + strand, within Pf1N1B4_428 at 499.050 kb on - strand, within Pf1N1B4_428 at 499.050 kb on - strand at 499.051 kb on + strand, within Pf1N1B4_428 at 499.051 kb on + strand, within Pf1N1B4_428 at 499.051 kb on + strand, within Pf1N1B4_428 at 499.051 kb on + strand, within Pf1N1B4_428 at 499.052 kb on - strand, within Pf1N1B4_428 at 499.052 kb on - strand, within Pf1N1B4_428 at 499.052 kb on - strand, within Pf1N1B4_428 at 499.058 kb on + strand, within Pf1N1B4_428 at 499.064 kb on + strand at 499.065 kb on - strand at 499.065 kb on - strand at 499.065 kb on - strand at 499.068 kb on + strand at 499.068 kb on + strand at 499.068 kb on + strand at 499.071 kb on + strand at 499.071 kb on + strand at 499.071 kb on + strand at 499.071 kb on + strand at 499.071 kb on + strand at 499.071 kb on + strand at 499.071 kb on + strand at 499.071 kb on + strand at 499.071 kb on + strand at 499.071 kb on + strand at 499.071 kb on + strand at 499.071 kb on + strand at 499.079 kb on + strand at 499.191 kb on + strand at 499.627 kb on + strand, within Pf1N1B4_429 at 499.628 kb on - strand, within Pf1N1B4_429 at 499.655 kb on + strand, within Pf1N1B4_429 at 499.655 kb on + strand, within Pf1N1B4_429 at 499.655 kb on + strand, within Pf1N1B4_429 at 499.656 kb on - strand, within Pf1N1B4_429 at 499.737 kb on - strand at 499.750 kb on + strand at 499.750 kb on + strand at 499.763 kb on - strand at 499.788 kb on + strand at 499.789 kb on - strand at 499.789 kb on - strand at 499.863 kb on + strand at 499.903 kb on + strand at 499.903 kb on + strand at 499.904 kb on - strand at 499.904 kb on - strand at 499.962 kb on + strand at 499.962 kb on + strand at 499.962 kb on + strand at 499.962 kb on + strand at 499.963 kb on - strand at 499.972 kb on + strand at 500.094 kb on + strand at 500.094 kb on + strand at 500.094 kb on + strand at 500.095 kb on - strand at 500.095 kb on - strand at 500.104 kb on - strand at 500.111 kb on + strand at 500.129 kb on - strand at 500.235 kb on - strand at 500.338 kb on + strand at 500.386 kb on + strand, within Pf1N1B4_430 at 500.387 kb on - strand, within Pf1N1B4_430 at 500.387 kb on - strand, within Pf1N1B4_430 at 500.416 kb on - strand, within Pf1N1B4_430 at 500.416 kb on - strand, within Pf1N1B4_430 at 500.515 kb on + strand at 500.560 kb on + strand at 500.613 kb on + strand at 500.615 kb on + strand at 500.615 kb on + strand at 500.615 kb on + strand at 500.615 kb on + strand at 500.615 kb on + strand at 500.615 kb on + strand at 500.615 kb on + strand at 500.616 kb on - strand at 500.616 kb on - strand at 500.616 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 498,478 + -0.9 498,587 + Pf1N1B4_428 0.53 -1.6 498,587 + Pf1N1B4_428 0.53 -1.3 498,610 - Pf1N1B4_428 0.55 +0.7 498,635 + Pf1N1B4_428 0.57 -0.3 498,645 + Pf1N1B4_428 0.58 +0.3 498,646 - -1.1 498,646 - Pf1N1B4_428 0.58 -0.9 498,726 + Pf1N1B4_428 0.64 +0.4 498,726 + Pf1N1B4_428 0.64 -1.1 498,727 - Pf1N1B4_428 0.64 +0.5 498,727 - Pf1N1B4_428 0.64 -0.3 498,728 + +2.1 498,728 + Pf1N1B4_428 0.64 +0.7 498,728 + Pf1N1B4_428 0.64 -0.1 498,728 + Pf1N1B4_428 0.64 -0.3 498,729 - Pf1N1B4_428 0.64 -0.3 498,729 - +1.1 498,729 - Pf1N1B4_428 0.64 +0.7 498,729 - Pf1N1B4_428 0.64 +1.1 498,742 - Pf1N1B4_428 0.65 +0.8 498,742 - Pf1N1B4_428 0.65 +0.5 498,762 + Pf1N1B4_428 0.67 -0.3 498,762 + Pf1N1B4_428 0.67 -1.2 498,762 + Pf1N1B4_428 0.67 +1.5 498,762 + Pf1N1B4_428 0.67 -0.7 498,763 - Pf1N1B4_428 0.67 -3.0 498,763 - Pf1N1B4_428 0.67 -1.1 498,774 + Pf1N1B4_428 0.68 -0.8 498,775 - Pf1N1B4_428 0.68 -1.4 498,775 - Pf1N1B4_428 0.68 -0.3 498,830 + Pf1N1B4_428 0.72 +0.1 498,918 + Pf1N1B4_428 0.79 +0.5 498,918 + -0.5 498,948 + Pf1N1B4_428 0.81 -0.4 498,948 + Pf1N1B4_428 0.81 -0.2 499,049 + Pf1N1B4_428 0.89 -0.9 499,049 + Pf1N1B4_428 0.89 -0.2 499,049 + Pf1N1B4_428 0.89 +0.1 499,049 + Pf1N1B4_428 0.89 -0.1 499,050 - Pf1N1B4_428 0.89 -1.7 499,050 - -0.5 499,051 + Pf1N1B4_428 0.89 -0.5 499,051 + Pf1N1B4_428 0.89 -0.2 499,051 + Pf1N1B4_428 0.89 +1.5 499,051 + Pf1N1B4_428 0.89 +0.1 499,052 - Pf1N1B4_428 0.89 +0.7 499,052 - Pf1N1B4_428 0.89 -1.5 499,052 - Pf1N1B4_428 0.89 +0.7 499,058 + Pf1N1B4_428 0.90 +1.1 499,064 + -0.1 499,065 - -0.6 499,065 - -1.4 499,065 - -0.4 499,068 + -1.7 499,068 + -0.1 499,068 + -1.5 499,071 + +0.7 499,071 + -0.2 499,071 + +0.9 499,071 + +1.5 499,071 + -0.3 499,071 + +0.6 499,071 + +0.3 499,071 + -0.1 499,071 + +0.5 499,071 + -0.8 499,071 + +0.3 499,071 + +1.1 499,079 + -2.1 499,191 + +0.1 499,627 + Pf1N1B4_429 0.74 -2.0 499,628 - Pf1N1B4_429 0.75 -0.3 499,655 + Pf1N1B4_429 0.84 +0.1 499,655 + Pf1N1B4_429 0.84 -0.9 499,655 + Pf1N1B4_429 0.84 -0.1 499,656 - Pf1N1B4_429 0.84 -0.9 499,737 - -0.2 499,750 + -1.6 499,750 + +0.3 499,763 - +1.1 499,788 + -1.0 499,789 - +0.0 499,789 - +0.6 499,863 + +0.5 499,903 + +1.1 499,903 + -1.7 499,904 - -0.7 499,904 - +0.2 499,962 + -0.5 499,962 + +0.8 499,962 + -0.5 499,962 + +1.5 499,963 - -0.6 499,972 + -1.5 500,094 + +0.4 500,094 + -0.3 500,094 + -0.1 500,095 - -0.9 500,095 - +0.3 500,104 - -2.4 500,111 + -1.7 500,129 - -1.2 500,235 - -1.9 500,338 + -0.1 500,386 + Pf1N1B4_430 0.14 -0.4 500,387 - Pf1N1B4_430 0.15 -0.2 500,387 - Pf1N1B4_430 0.15 -1.4 500,416 - Pf1N1B4_430 0.39 +0.8 500,416 - Pf1N1B4_430 0.39 -1.2 500,515 + +0.5 500,560 + -0.0 500,613 + -0.1 500,615 + -1.8 500,615 + -0.5 500,615 + +0.3 500,615 + -0.8 500,615 + -1.7 500,615 + +1.4 500,615 + -2.2 500,616 - +0.6 500,616 - -0.7 500,616 - -0.2
Or see this region's nucleotide sequence