Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02327

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCCNA_02326 and CCNA_02327 are separated by 154 nucleotidesCCNA_02327 and CCNA_02328 are separated by 238 nucleotides CCNA_02326: CCNA_02326 - acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase, at 2,468,002 to 2,469,219 _02326 CCNA_02327: CCNA_02327 - ABC transporter permease protein, at 2,469,374 to 2,470,195 _02327 CCNA_02328: CCNA_02328 - cell cycle regulatory protein GcrA, at 2,470,434 to 2,470,955 _02328 Position (kb) 2469 2470 2471Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2469.202 kb on - strandat 2469.212 kb on + strandat 2469.222 kb on - strandat 2469.275 kb on - strandat 2469.338 kb on - strandat 2469.385 kb on - strandat 2469.406 kb on + strandat 2469.422 kb on + strandat 2469.435 kb on - strandat 2469.577 kb on + strand, within CCNA_02327at 2469.577 kb on + strand, within CCNA_02327at 2469.577 kb on + strand, within CCNA_02327at 2469.577 kb on + strand, within CCNA_02327at 2469.585 kb on - strand, within CCNA_02327at 2469.585 kb on - strand, within CCNA_02327at 2469.585 kb on - strand, within CCNA_02327at 2469.585 kb on - strand, within CCNA_02327at 2469.585 kb on - strand, within CCNA_02327at 2469.585 kb on - strand, within CCNA_02327at 2469.585 kb on - strand, within CCNA_02327at 2469.585 kb on - strand, within CCNA_02327at 2469.585 kb on - strand, within CCNA_02327at 2469.599 kb on + strand, within CCNA_02327at 2469.608 kb on - strand, within CCNA_02327at 2469.620 kb on - strand, within CCNA_02327at 2469.638 kb on - strand, within CCNA_02327at 2469.638 kb on - strand, within CCNA_02327at 2469.638 kb on - strand, within CCNA_02327at 2469.723 kb on + strand, within CCNA_02327at 2469.723 kb on + strand, within CCNA_02327at 2469.723 kb on + strand, within CCNA_02327at 2469.723 kb on + strand, within CCNA_02327at 2469.723 kb on + strand, within CCNA_02327at 2469.723 kb on + strand, within CCNA_02327at 2469.723 kb on + strand, within CCNA_02327at 2469.723 kb on + strand, within CCNA_02327at 2469.723 kb on + strand, within CCNA_02327at 2469.723 kb on + strand, within CCNA_02327at 2469.723 kb on + strand, within CCNA_02327at 2469.723 kb on + strand, within CCNA_02327at 2469.723 kb on + strand, within CCNA_02327at 2469.723 kb on + strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.731 kb on - strand, within CCNA_02327at 2469.793 kb on + strand, within CCNA_02327at 2469.803 kb on + strand, within CCNA_02327at 2469.828 kb on + strand, within CCNA_02327at 2469.828 kb on + strand, within CCNA_02327at 2469.836 kb on - strand, within CCNA_02327at 2469.836 kb on - strand, within CCNA_02327at 2469.836 kb on - strand, within CCNA_02327at 2469.893 kb on + strand, within CCNA_02327at 2469.935 kb on - strand, within CCNA_02327at 2469.945 kb on + strand, within CCNA_02327at 2469.963 kb on - strand, within CCNA_02327at 2469.989 kb on + strand, within CCNA_02327at 2469.997 kb on - strand, within CCNA_02327at 2469.997 kb on - strand, within CCNA_02327at 2469.997 kb on - strand, within CCNA_02327at 2469.997 kb on - strand, within CCNA_02327at 2470.023 kb on + strand, within CCNA_02327at 2470.035 kb on + strand, within CCNA_02327at 2470.035 kb on + strand, within CCNA_02327at 2470.043 kb on - strand, within CCNA_02327at 2470.043 kb on - strand, within CCNA_02327at 2470.043 kb on - strand, within CCNA_02327at 2470.043 kb on - strand, within CCNA_02327at 2470.043 kb on - strand, within CCNA_02327at 2470.043 kb on - strand, within CCNA_02327at 2470.047 kb on + strand, within CCNA_02327at 2470.047 kb on + strand, within CCNA_02327at 2470.047 kb on + strand, within CCNA_02327at 2470.055 kb on - strand, within CCNA_02327at 2470.055 kb on - strand, within CCNA_02327at 2470.115 kb on - strandat 2470.134 kb on - strandat 2470.135 kb on + strandat 2470.144 kb on - strandat 2470.152 kb on + strandat 2470.187 kb on + strandat 2470.198 kb on + strandat 2470.198 kb on + strandat 2470.198 kb on + strandat 2470.213 kb on - strandat 2470.213 kb on - strandat 2470.335 kb on + strandat 2470.383 kb on - strandat 2470.411 kb on + strandat 2470.888 kb on + strand, within CCNA_02328at 2470.901 kb on - strand, within CCNA_02328at 2470.928 kb on + strandat 2470.931 kb on - strandat 2470.959 kb on + strandat 2470.959 kb on + strandat 2470.967 kb on - strandat 2470.967 kb on - strandat 2471.021 kb on + strandat 2471.033 kb on + strandat 2471.041 kb on - strandat 2471.041 kb on - strandat 2471.041 kb on - strandat 2471.041 kb on - strandat 2471.091 kb on - strandat 2471.113 kb on + strandat 2471.128 kb on + strandat 2471.148 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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2,469,202 - +0.5
2,469,212 + +0.8
2,469,222 - +0.7
2,469,275 - -1.3
2,469,338 - +1.2
2,469,385 - -1.9
2,469,406 + -0.7
2,469,422 + -2.5
2,469,435 - -1.1
2,469,577 + CCNA_02327 0.25 +1.1
2,469,577 + CCNA_02327 0.25 -2.9
2,469,577 + CCNA_02327 0.25 -1.6
2,469,577 + CCNA_02327 0.25 -3.2
2,469,585 - CCNA_02327 0.26 -3.8
2,469,585 - CCNA_02327 0.26 +0.3
2,469,585 - CCNA_02327 0.26 -0.6
2,469,585 - CCNA_02327 0.26 -1.7
2,469,585 - CCNA_02327 0.26 -2.3
2,469,585 - CCNA_02327 0.26 -2.3
2,469,585 - CCNA_02327 0.26 -0.3
2,469,585 - CCNA_02327 0.26 -1.1
2,469,585 - CCNA_02327 0.26 -3.3
2,469,599 + CCNA_02327 0.27 -1.7
2,469,608 - CCNA_02327 0.28 -2.8
2,469,620 - CCNA_02327 0.30 -1.8
2,469,638 - CCNA_02327 0.32 -2.2
2,469,638 - CCNA_02327 0.32 -3.1
2,469,638 - CCNA_02327 0.32 -2.2
2,469,723 + CCNA_02327 0.42 -1.9
2,469,723 + CCNA_02327 0.42 -2.1
2,469,723 + CCNA_02327 0.42 -0.5
2,469,723 + CCNA_02327 0.42 -0.9
2,469,723 + CCNA_02327 0.42 -2.4
2,469,723 + CCNA_02327 0.42 -1.9
2,469,723 + CCNA_02327 0.42 -1.1
2,469,723 + CCNA_02327 0.42 -3.1
2,469,723 + CCNA_02327 0.42 -4.2
2,469,723 + CCNA_02327 0.42 -2.9
2,469,723 + CCNA_02327 0.42 -1.5
2,469,723 + CCNA_02327 0.42 -1.5
2,469,723 + CCNA_02327 0.42 -2.9
2,469,723 + CCNA_02327 0.42 -0.9
2,469,731 - CCNA_02327 0.43 -0.7
2,469,731 - CCNA_02327 0.43 -3.9
2,469,731 - CCNA_02327 0.43 -1.9
2,469,731 - CCNA_02327 0.43 +0.2
2,469,731 - CCNA_02327 0.43 -1.7
2,469,731 - CCNA_02327 0.43 -0.9
2,469,731 - CCNA_02327 0.43 -1.4
2,469,731 - CCNA_02327 0.43 -1.9
2,469,731 - CCNA_02327 0.43 -3.4
2,469,731 - CCNA_02327 0.43 -2.3
2,469,731 - CCNA_02327 0.43 -1.7
2,469,731 - CCNA_02327 0.43 -0.1
2,469,731 - CCNA_02327 0.43 -1.8
2,469,731 - CCNA_02327 0.43 -2.3
2,469,731 - CCNA_02327 0.43 -2.0
2,469,731 - CCNA_02327 0.43 -2.7
2,469,731 - CCNA_02327 0.43 -1.2
2,469,731 - CCNA_02327 0.43 -2.9
2,469,731 - CCNA_02327 0.43 -1.4
2,469,731 - CCNA_02327 0.43 -1.8
2,469,731 - CCNA_02327 0.43 -0.1
2,469,731 - CCNA_02327 0.43 -2.2
2,469,731 - CCNA_02327 0.43 -3.3
2,469,731 - CCNA_02327 0.43 -0.8
2,469,731 - CCNA_02327 0.43 -1.9
2,469,731 - CCNA_02327 0.43 -1.1
2,469,731 - CCNA_02327 0.43 -3.5
2,469,731 - CCNA_02327 0.43 -2.1
2,469,793 + CCNA_02327 0.51 -2.0
2,469,803 + CCNA_02327 0.52 -1.8
2,469,828 + CCNA_02327 0.55 -2.4
2,469,828 + CCNA_02327 0.55 -2.2
2,469,836 - CCNA_02327 0.56 -0.5
2,469,836 - CCNA_02327 0.56 -2.2
2,469,836 - CCNA_02327 0.56 -0.3
2,469,893 + CCNA_02327 0.63 +0.1
2,469,935 - CCNA_02327 0.68 -1.8
2,469,945 + CCNA_02327 0.69 -1.8
2,469,963 - CCNA_02327 0.72 -1.3
2,469,989 + CCNA_02327 0.75 -2.5
2,469,997 - CCNA_02327 0.76 -1.9
2,469,997 - CCNA_02327 0.76 -3.3
2,469,997 - CCNA_02327 0.76 -2.5
2,469,997 - CCNA_02327 0.76 -1.2
2,470,023 + CCNA_02327 0.79 -0.2
2,470,035 + CCNA_02327 0.80 -1.6
2,470,035 + CCNA_02327 0.80 -2.5
2,470,043 - CCNA_02327 0.81 -2.6
2,470,043 - CCNA_02327 0.81 -0.7
2,470,043 - CCNA_02327 0.81 -4.2
2,470,043 - CCNA_02327 0.81 -1.3
2,470,043 - CCNA_02327 0.81 -2.4
2,470,043 - CCNA_02327 0.81 -2.0
2,470,047 + CCNA_02327 0.82 -2.4
2,470,047 + CCNA_02327 0.82 -0.7
2,470,047 + CCNA_02327 0.82 -1.7
2,470,055 - CCNA_02327 0.83 -3.3
2,470,055 - CCNA_02327 0.83 -1.5
2,470,115 - -1.3
2,470,134 - -1.5
2,470,135 + -0.5
2,470,144 - -0.8
2,470,152 + -0.9
2,470,187 + -0.5
2,470,198 + -0.1
2,470,198 + -0.3
2,470,198 + -0.7
2,470,213 - +0.6
2,470,213 - +0.7
2,470,335 + +1.3
2,470,383 - +0.5
2,470,411 + +0.0
2,470,888 + CCNA_02328 0.87 +1.1
2,470,901 - CCNA_02328 0.89 -3.5
2,470,928 + +0.9
2,470,931 - +0.1
2,470,959 + +1.5
2,470,959 + +2.1
2,470,967 - -1.6
2,470,967 - -0.7
2,471,021 + -0.8
2,471,033 + -1.8
2,471,041 - -1.2
2,471,041 - -0.1
2,471,041 - -0.2
2,471,041 - -1.1
2,471,091 - +1.4
2,471,113 + +1.0
2,471,128 + -0.5
2,471,148 - +0.5

Or see this region's nucleotide sequence