Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_02326 and CCNA_02327 are separated by 154 nucleotides CCNA_02327 and CCNA_02328 are separated by 238 nucleotides
CCNA_02326: CCNA_02326 - acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase, at 2,468,002 to 2,469,219
_02326
CCNA_02327: CCNA_02327 - ABC transporter permease protein, at 2,469,374 to 2,470,195
_02327
CCNA_02328: CCNA_02328 - cell cycle regulatory protein GcrA, at 2,470,434 to 2,470,955
_02328
Position (kb)
2469
2470
2471 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2469.202 kb on - strand at 2469.212 kb on + strand at 2469.222 kb on - strand at 2469.275 kb on - strand at 2469.338 kb on - strand at 2469.385 kb on - strand at 2469.406 kb on + strand at 2469.422 kb on + strand at 2469.435 kb on - strand at 2469.577 kb on + strand, within CCNA_02327 at 2469.577 kb on + strand, within CCNA_02327 at 2469.577 kb on + strand, within CCNA_02327 at 2469.577 kb on + strand, within CCNA_02327 at 2469.585 kb on - strand, within CCNA_02327 at 2469.585 kb on - strand, within CCNA_02327 at 2469.585 kb on - strand, within CCNA_02327 at 2469.585 kb on - strand, within CCNA_02327 at 2469.585 kb on - strand, within CCNA_02327 at 2469.585 kb on - strand, within CCNA_02327 at 2469.585 kb on - strand, within CCNA_02327 at 2469.585 kb on - strand, within CCNA_02327 at 2469.585 kb on - strand, within CCNA_02327 at 2469.599 kb on + strand, within CCNA_02327 at 2469.608 kb on - strand, within CCNA_02327 at 2469.620 kb on - strand, within CCNA_02327 at 2469.638 kb on - strand, within CCNA_02327 at 2469.638 kb on - strand, within CCNA_02327 at 2469.638 kb on - strand, within CCNA_02327 at 2469.723 kb on + strand, within CCNA_02327 at 2469.723 kb on + strand, within CCNA_02327 at 2469.723 kb on + strand, within CCNA_02327 at 2469.723 kb on + strand, within CCNA_02327 at 2469.723 kb on + strand, within CCNA_02327 at 2469.723 kb on + strand, within CCNA_02327 at 2469.723 kb on + strand, within CCNA_02327 at 2469.723 kb on + strand, within CCNA_02327 at 2469.723 kb on + strand, within CCNA_02327 at 2469.723 kb on + strand, within CCNA_02327 at 2469.723 kb on + strand, within CCNA_02327 at 2469.723 kb on + strand, within CCNA_02327 at 2469.723 kb on + strand, within CCNA_02327 at 2469.723 kb on + strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.731 kb on - strand, within CCNA_02327 at 2469.793 kb on + strand, within CCNA_02327 at 2469.803 kb on + strand, within CCNA_02327 at 2469.828 kb on + strand, within CCNA_02327 at 2469.828 kb on + strand, within CCNA_02327 at 2469.836 kb on - strand, within CCNA_02327 at 2469.836 kb on - strand, within CCNA_02327 at 2469.836 kb on - strand, within CCNA_02327 at 2469.893 kb on + strand, within CCNA_02327 at 2469.935 kb on - strand, within CCNA_02327 at 2469.945 kb on + strand, within CCNA_02327 at 2469.963 kb on - strand, within CCNA_02327 at 2469.989 kb on + strand, within CCNA_02327 at 2469.997 kb on - strand, within CCNA_02327 at 2469.997 kb on - strand, within CCNA_02327 at 2469.997 kb on - strand, within CCNA_02327 at 2469.997 kb on - strand, within CCNA_02327 at 2470.023 kb on + strand, within CCNA_02327 at 2470.035 kb on + strand, within CCNA_02327 at 2470.035 kb on + strand, within CCNA_02327 at 2470.043 kb on - strand, within CCNA_02327 at 2470.043 kb on - strand, within CCNA_02327 at 2470.043 kb on - strand, within CCNA_02327 at 2470.043 kb on - strand, within CCNA_02327 at 2470.043 kb on - strand, within CCNA_02327 at 2470.043 kb on - strand, within CCNA_02327 at 2470.047 kb on + strand, within CCNA_02327 at 2470.047 kb on + strand, within CCNA_02327 at 2470.047 kb on + strand, within CCNA_02327 at 2470.055 kb on - strand, within CCNA_02327 at 2470.055 kb on - strand, within CCNA_02327 at 2470.115 kb on - strand at 2470.134 kb on - strand at 2470.135 kb on + strand at 2470.144 kb on - strand at 2470.152 kb on + strand at 2470.187 kb on + strand at 2470.198 kb on + strand at 2470.198 kb on + strand at 2470.198 kb on + strand at 2470.213 kb on - strand at 2470.213 kb on - strand at 2470.335 kb on + strand at 2470.383 kb on - strand at 2470.411 kb on + strand at 2470.888 kb on + strand, within CCNA_02328 at 2470.901 kb on - strand, within CCNA_02328 at 2470.928 kb on + strand at 2470.931 kb on - strand at 2470.959 kb on + strand at 2470.959 kb on + strand at 2470.967 kb on - strand at 2470.967 kb on - strand at 2471.021 kb on + strand at 2471.033 kb on + strand at 2471.041 kb on - strand at 2471.041 kb on - strand at 2471.041 kb on - strand at 2471.041 kb on - strand at 2471.091 kb on - strand at 2471.113 kb on + strand at 2471.128 kb on + strand at 2471.148 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,469,202 - +0.5 2,469,212 + +0.8 2,469,222 - +0.7 2,469,275 - -1.3 2,469,338 - +1.2 2,469,385 - -1.9 2,469,406 + -0.7 2,469,422 + -2.5 2,469,435 - -1.1 2,469,577 + CCNA_02327 0.25 +1.1 2,469,577 + CCNA_02327 0.25 -2.9 2,469,577 + CCNA_02327 0.25 -1.6 2,469,577 + CCNA_02327 0.25 -3.2 2,469,585 - CCNA_02327 0.26 -3.8 2,469,585 - CCNA_02327 0.26 +0.3 2,469,585 - CCNA_02327 0.26 -0.6 2,469,585 - CCNA_02327 0.26 -1.7 2,469,585 - CCNA_02327 0.26 -2.3 2,469,585 - CCNA_02327 0.26 -2.3 2,469,585 - CCNA_02327 0.26 -0.3 2,469,585 - CCNA_02327 0.26 -1.1 2,469,585 - CCNA_02327 0.26 -3.3 2,469,599 + CCNA_02327 0.27 -1.7 2,469,608 - CCNA_02327 0.28 -2.8 2,469,620 - CCNA_02327 0.30 -1.8 2,469,638 - CCNA_02327 0.32 -2.2 2,469,638 - CCNA_02327 0.32 -3.1 2,469,638 - CCNA_02327 0.32 -2.2 2,469,723 + CCNA_02327 0.42 -1.9 2,469,723 + CCNA_02327 0.42 -2.1 2,469,723 + CCNA_02327 0.42 -0.5 2,469,723 + CCNA_02327 0.42 -0.9 2,469,723 + CCNA_02327 0.42 -2.4 2,469,723 + CCNA_02327 0.42 -1.9 2,469,723 + CCNA_02327 0.42 -1.1 2,469,723 + CCNA_02327 0.42 -3.1 2,469,723 + CCNA_02327 0.42 -4.2 2,469,723 + CCNA_02327 0.42 -2.9 2,469,723 + CCNA_02327 0.42 -1.5 2,469,723 + CCNA_02327 0.42 -1.5 2,469,723 + CCNA_02327 0.42 -2.9 2,469,723 + CCNA_02327 0.42 -0.9 2,469,731 - CCNA_02327 0.43 -0.7 2,469,731 - CCNA_02327 0.43 -3.9 2,469,731 - CCNA_02327 0.43 -1.9 2,469,731 - CCNA_02327 0.43 +0.2 2,469,731 - CCNA_02327 0.43 -1.7 2,469,731 - CCNA_02327 0.43 -0.9 2,469,731 - CCNA_02327 0.43 -1.4 2,469,731 - CCNA_02327 0.43 -1.9 2,469,731 - CCNA_02327 0.43 -3.4 2,469,731 - CCNA_02327 0.43 -2.3 2,469,731 - CCNA_02327 0.43 -1.7 2,469,731 - CCNA_02327 0.43 -0.1 2,469,731 - CCNA_02327 0.43 -1.8 2,469,731 - CCNA_02327 0.43 -2.3 2,469,731 - CCNA_02327 0.43 -2.0 2,469,731 - CCNA_02327 0.43 -2.7 2,469,731 - CCNA_02327 0.43 -1.2 2,469,731 - CCNA_02327 0.43 -2.9 2,469,731 - CCNA_02327 0.43 -1.4 2,469,731 - CCNA_02327 0.43 -1.8 2,469,731 - CCNA_02327 0.43 -0.1 2,469,731 - CCNA_02327 0.43 -2.2 2,469,731 - CCNA_02327 0.43 -3.3 2,469,731 - CCNA_02327 0.43 -0.8 2,469,731 - CCNA_02327 0.43 -1.9 2,469,731 - CCNA_02327 0.43 -1.1 2,469,731 - CCNA_02327 0.43 -3.5 2,469,731 - CCNA_02327 0.43 -2.1 2,469,793 + CCNA_02327 0.51 -2.0 2,469,803 + CCNA_02327 0.52 -1.8 2,469,828 + CCNA_02327 0.55 -2.4 2,469,828 + CCNA_02327 0.55 -2.2 2,469,836 - CCNA_02327 0.56 -0.5 2,469,836 - CCNA_02327 0.56 -2.2 2,469,836 - CCNA_02327 0.56 -0.3 2,469,893 + CCNA_02327 0.63 +0.1 2,469,935 - CCNA_02327 0.68 -1.8 2,469,945 + CCNA_02327 0.69 -1.8 2,469,963 - CCNA_02327 0.72 -1.3 2,469,989 + CCNA_02327 0.75 -2.5 2,469,997 - CCNA_02327 0.76 -1.9 2,469,997 - CCNA_02327 0.76 -3.3 2,469,997 - CCNA_02327 0.76 -2.5 2,469,997 - CCNA_02327 0.76 -1.2 2,470,023 + CCNA_02327 0.79 -0.2 2,470,035 + CCNA_02327 0.80 -1.6 2,470,035 + CCNA_02327 0.80 -2.5 2,470,043 - CCNA_02327 0.81 -2.6 2,470,043 - CCNA_02327 0.81 -0.7 2,470,043 - CCNA_02327 0.81 -4.2 2,470,043 - CCNA_02327 0.81 -1.3 2,470,043 - CCNA_02327 0.81 -2.4 2,470,043 - CCNA_02327 0.81 -2.0 2,470,047 + CCNA_02327 0.82 -2.4 2,470,047 + CCNA_02327 0.82 -0.7 2,470,047 + CCNA_02327 0.82 -1.7 2,470,055 - CCNA_02327 0.83 -3.3 2,470,055 - CCNA_02327 0.83 -1.5 2,470,115 - -1.3 2,470,134 - -1.5 2,470,135 + -0.5 2,470,144 - -0.8 2,470,152 + -0.9 2,470,187 + -0.5 2,470,198 + -0.1 2,470,198 + -0.3 2,470,198 + -0.7 2,470,213 - +0.6 2,470,213 - +0.7 2,470,335 + +1.3 2,470,383 - +0.5 2,470,411 + +0.0 2,470,888 + CCNA_02328 0.87 +1.1 2,470,901 - CCNA_02328 0.89 -3.5 2,470,928 + +0.9 2,470,931 - +0.1 2,470,959 + +1.5 2,470,959 + +2.1 2,470,967 - -1.6 2,470,967 - -0.7 2,471,021 + -0.8 2,471,033 + -1.8 2,471,041 - -1.2 2,471,041 - -0.1 2,471,041 - -0.2 2,471,041 - -1.1 2,471,091 - +1.4 2,471,113 + +1.0 2,471,128 + -0.5 2,471,148 - +0.5
Or see this region's nucleotide sequence