Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01200

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
1,322,486	+				-0.9
1,322,486	+				-0.5
1,322,496	+				-1.0
1,322,507	+				-0.9
1,322,507	+				-0.4
1,322,507	+				-1.6
1,322,507	+				-1.5
1,322,507	+				-0.8
1,322,507	+				-0.9
1,322,507	+				-0.8
1,322,507	+				-0.5
1,322,507	+				+1.4
1,322,509	+				+1.6
1,322,515	-				-0.8
1,322,515	-				-0.7
1,322,515	-				-2.0
1,322,520	-				-1.0
1,322,582	-				-0.9
1,322,621	-				-0.5
1,322,628	+				-1.2
1,322,628	+				-1.5
1,322,631	+				-1.3
1,322,646	-				-2.0
1,322,646	-				-0.9
1,322,719	+		CCNA_01199	0.17	-1.7
1,322,721	+		CCNA_01199	0.18	-1.0
1,322,789	+		CCNA_01199	0.26	+0.7
1,322,801	+		CCNA_01199	0.27	-1.8
1,322,806	+		CCNA_01199	0.27	-1.2
1,322,814	-		CCNA_01199	0.28	-0.7
1,322,814	-				-0.9
1,322,825	+		CCNA_01199	0.30	-1.6
1,322,825	+		CCNA_01199	0.30	-1.2
1,322,825	+		CCNA_01199	0.30	-2.4
1,322,830	+		CCNA_01199	0.30	+1.7
1,322,830	+		CCNA_01199	0.30	-0.6
1,322,830	+		CCNA_01199	0.30	-0.5
1,322,838	-		CCNA_01199	0.31	-3.0
1,322,944	+		CCNA_01199	0.43	-1.6
1,322,944	+		CCNA_01199	0.43	-1.3
1,322,944	+		CCNA_01199	0.43	-0.1
1,322,944	+		CCNA_01199	0.43	-2.9
1,322,944	+		CCNA_01199	0.43	-2.0
1,322,952	-		CCNA_01199	0.44	-1.4
1,322,952	-		CCNA_01199	0.44	-2.5
1,322,952	-		CCNA_01199	0.44	-2.2
1,322,960	+		CCNA_01199	0.45	-2.2
1,322,960	+		CCNA_01199	0.45	-1.6
1,322,968	-		CCNA_01199	0.46	-2.0
1,322,982	+		CCNA_01199	0.48	-1.3
1,322,990	-		CCNA_01199	0.49	-1.7
1,322,990	-		CCNA_01199	0.49	-1.5
1,322,992	+		CCNA_01199	0.49	-0.0
1,322,997	+		CCNA_01199	0.49	-1.4
1,323,002	+		CCNA_01199	0.50	-1.6
1,323,005	-		CCNA_01199	0.50	-2.4
1,323,024	+		CCNA_01199	0.53	-2.8
1,323,032	-		CCNA_01199	0.53	-1.7
1,323,069	-		CCNA_01199	0.58	-0.5
1,323,177	+		CCNA_01199	0.70	-0.4
1,323,185	-		CCNA_01199	0.71	-1.0
1,323,212	+		CCNA_01199	0.74	-1.7
1,323,245	+		CCNA_01199	0.78	-1.4
1,323,385	+				+0.4
1,323,393	-				-2.4
1,323,443	-				+0.2
1,323,445	-				-1.5
1,323,515	-				+1.4
1,323,575	+				-0.6
1,323,607	+				+0.8
1,323,609	-				+0.5
1,323,626	+				+0.7
1,323,665	+				+1.8
1,323,666	+				+0.0
1,323,668	+				-1.9
1,323,673	-				-0.6
1,323,685	-				-0.4
1,323,685	-				-0.3
1,323,726	+		CCNA_01200	0.11	-0.8
1,323,756	+		CCNA_01200	0.12	+0.1
1,323,764	-		CCNA_01200	0.13	+0.9
1,323,776	+		CCNA_01200	0.13	+1.0
1,323,803	-		CCNA_01200	0.14	-1.6
1,323,812	+		CCNA_01200	0.15	-2.1
1,323,812	+		CCNA_01200	0.15	-1.7
1,323,812	+		CCNA_01200	0.15	-0.5
1,323,812	+		CCNA_01200	0.15	+0.3
1,323,820	-		CCNA_01200	0.15	+0.7
1,323,820	-		CCNA_01200	0.15	-0.7
1,323,841	-		CCNA_01200	0.16	+0.7
1,323,848	+		CCNA_01200	0.16	-1.1
1,323,848	+		CCNA_01200	0.16	-0.7
1,323,848	+		CCNA_01200	0.16	-1.2
1,323,856	-		CCNA_01200	0.17	+0.9
1,323,857	+		CCNA_01200	0.17	-0.0
1,323,865	-		CCNA_01200	0.17	-1.3
1,323,866	-		CCNA_01200	0.17	-1.4
1,323,892	-		CCNA_01200	0.18	-2.2
1,323,916	-		CCNA_01200	0.19	-0.3
1,323,933	+		CCNA_01200	0.20	-0.6
1,323,933	+		CCNA_01200	0.20	-1.4
1,323,933	+		CCNA_01200	0.20	-1.2
1,323,933	+		CCNA_01200	0.20	-0.2
1,323,973	+		CCNA_01200	0.22	-1.1
1,323,973	+		CCNA_01200	0.22	-0.5
1,323,981	-		CCNA_01200	0.22	-2.2
1,324,024	-		CCNA_01200	0.24	-2.4
1,324,077	+		CCNA_01200	0.27	-1.7
1,324,077	+		CCNA_01200	0.27	+0.6
1,324,085	-		CCNA_01200	0.27	-0.6
1,324,085	-		CCNA_01200	0.27	-0.7
1,324,096	+		CCNA_01200	0.27	-1.5
1,324,103	+		CCNA_01200	0.28	+0.5
1,324,132	+		CCNA_01200	0.29	+0.5
1,324,177	+		CCNA_01200	0.31	-2.4
1,324,180	-		CCNA_01200	0.31	-1.5
1,324,180	-		CCNA_01200	0.31	-1.4
1,324,184	+		CCNA_01200	0.31	-1.4
1,324,185	-		CCNA_01200	0.31	-0.3
1,324,185	-		CCNA_01200	0.31	-1.4
1,324,192	-		CCNA_01200	0.32	+1.0
1,324,214	+		CCNA_01200	0.33	+0.3
1,324,250	+		CCNA_01200	0.34	+0.7
1,324,284	+		CCNA_01200	0.36	-0.0
1,324,284	+		CCNA_01200	0.36	-3.3
1,324,285	-		CCNA_01200	0.36	-1.4
1,324,286	-		CCNA_01200	0.36	-0.0
1,324,292	-		CCNA_01200	0.36	-0.7
1,324,292	-		CCNA_01200	0.36	-3.2
1,324,350	-		CCNA_01200	0.39	-2.6
1,324,365	-		CCNA_01200	0.39	-2.6
1,324,378	+		CCNA_01200	0.40	-1.0
1,324,390	+		CCNA_01200	0.40	+0.2
1,324,390	+		CCNA_01200	0.40	+0.9
1,324,398	-		CCNA_01200	0.41	-3.1
1,324,424	+		CCNA_01200	0.42	+0.4
1,324,424	+		CCNA_01200	0.42	+0.2
1,324,432	-		CCNA_01200	0.42	-1.2
1,324,473	-		CCNA_01200	0.44	-0.7
1,324,475	+		CCNA_01200	0.44	-1.2
1,324,480	+		CCNA_01200	0.44	+2.3
1,324,480	+		CCNA_01200	0.44	-0.7
1,324,508	-		CCNA_01200	0.46	-0.4
1,324,586	+		CCNA_01200	0.49	+0.6
1,324,586	+		CCNA_01200	0.49	+1.1
1,324,586	+		CCNA_01200	0.49	-1.4
1,324,594	-		CCNA_01200	0.49	-0.5
1,324,622	+		CCNA_01200	0.51	+0.0
1,324,622	+		CCNA_01200	0.51	+0.0
1,324,622	+		CCNA_01200	0.51	+0.4
1,324,622	+		CCNA_01200	0.51	-0.2
1,324,622	+		CCNA_01200	0.51	+1.2
1,324,630	-		CCNA_01200	0.51	-1.2
1,324,630	-		CCNA_01200	0.51	-2.5
1,324,630	-		CCNA_01200	0.51	-0.9
1,324,633	+		CCNA_01200	0.51	-0.6
1,324,663	-		CCNA_01200	0.52	-1.7
1,324,665	+		CCNA_01200	0.53	-1.4
1,324,672	-		CCNA_01200	0.53	-0.1
1,324,672	-		CCNA_01200	0.53	+0.8
1,324,713	-		CCNA_01200	0.55	-1.9
1,324,713	-		CCNA_01200	0.55	-1.2
1,324,744	+		CCNA_01200	0.56	+0.8
1,324,898	+		CCNA_01200	0.63	-2.4
1,324,906	-		CCNA_01200	0.63	-0.2
1,324,906	-		CCNA_01200	0.63	-0.9
1,324,906	-		CCNA_01200	0.63	-2.2
1,324,948	+		CCNA_01200	0.65	-1.4
1,325,011	+		CCNA_01200	0.68	-1.9
1,325,042	+		CCNA_01200	0.69	-1.2
1,325,047	+		CCNA_01200	0.70	-0.3
1,325,135	+		CCNA_01200	0.73	+0.3
1,325,135	+		CCNA_01200	0.73	-0.6
1,325,148	-		CCNA_01200	0.74	-2.3
1,325,196	+		CCNA_01200	0.76	+0.4
1,325,224	+		CCNA_01200	0.77	-2.1
1,325,224	-		CCNA_01200	0.77	-1.0
1,325,244	-		CCNA_01200	0.78	-1.4
1,325,257	+		CCNA_01200	0.79	-0.6
1,325,292	+		CCNA_01200	0.80	-0.2
1,325,300	-		CCNA_01200	0.81	-0.1
1,325,352	+		CCNA_01200	0.83	+0.2
1,325,352	+		CCNA_01200	0.83	+0.5
1,325,360	-		CCNA_01200	0.83	-1.4
1,325,435	+		CCNA_01200	0.87	-2.2
1,325,469	-		CCNA_01200	0.88	-2.3
1,325,484	-		CCNA_01200	0.89	-0.5
1,325,484	-		CCNA_01200	0.89	-1.3
1,325,484	-		CCNA_01200	0.89	-0.9
1,325,496	+		CCNA_01200	0.89	-0.3
1,325,504	-		CCNA_01200	0.90	+0.1
1,325,514	-				-0.2
1,325,514	-				-1.4
1,325,514	-				-0.6
1,325,553	+				-3.4
1,325,758	-				-0.4
1,325,789	+				+1.1
1,325,797	-				+0.2
1,325,808	-				-1.1
1,325,829	+				-1.1
1,325,830	+				-0.5
1,325,864	-		CCNA_01201	0.12	+1.1
1,325,874	+		CCNA_01201	0.14	-2.1
1,325,874	+		CCNA_01201	0.14	-1.7
1,325,887	-		CCNA_01201	0.16	+1.5
1,325,925	-		CCNA_01201	0.23	+0.8
1,325,964	+		CCNA_01201	0.31	-2.7
1,325,964	+		CCNA_01201	0.31	-2.6
1,325,964	+		CCNA_01201	0.31	-1.9
1,325,964	+		CCNA_01201	0.31	-1.7
1,325,964	+		CCNA_01201	0.31	+0.8
1,325,972	-		CCNA_01201	0.32	+1.1
1,325,972	-		CCNA_01201	0.32	+0.3
1,325,972	-		CCNA_01201	0.32	+0.3
1,325,972	-		CCNA_01201	0.32	+0.9
1,325,972	-		CCNA_01201	0.32	+2.3
1,325,972	-		CCNA_01201	0.32	+1.2
1,325,972	-		CCNA_01201	0.32	+0.3
1,325,982	-		CCNA_01201	0.34	+1.0
1,326,119	+		CCNA_01201	0.60	-0.3
1,326,129	+		CCNA_01201	0.62	+0.4
1,326,185	+		CCNA_01201	0.73	+0.4
1,326,193	-		CCNA_01201	0.74	+1.3
1,326,234	+		CCNA_01201	0.82	+0.0
1,326,296	-				+1.1
1,326,387	+				-0.5
1,326,389	-				+0.0
1,326,389	-				+0.6
1,326,395	-				+0.4
1,326,395	-				+0.6
1,326,395	-				+1.3
1,326,395	-				+1.0
1,326,406	-				-0.1
1,326,523	-				+1.7
1,326,538	-				+0.9
1,326,538	-				+2.1
1,326,546	-				+0.3
1,326,582	+		CCNA_01202	0.11	-1.3
1,326,595	-		CCNA_01202	0.11	+1.3
1,326,607	-				+2.9
1,326,607	-		CCNA_01202	0.12	+1.9
1,326,610	+		CCNA_01202	0.12	-1.1
1,326,663	-		CCNA_01202	0.14	+0.4