Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_26685

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_26675 and AO356_26680 are separated by 83 nucleotidesAO356_26680 and AO356_26685 are separated by 94 nucleotidesAO356_26685 and AO356_26690 are separated by 75 nucleotidesAO356_26690 and AO356_26695 overlap by 1 nucleotides AO356_26675: AO356_26675 - hypothetical protein, at 6,074,771 to 6,075,313 _26675 AO356_26680: AO356_26680 - hypothetical protein, at 6,075,397 to 6,076,095 _26680 AO356_26685: AO356_26685 - phosphate import ATP-binding protein PstB, at 6,076,190 to 6,076,951 _26685 AO356_26690: AO356_26690 - phosphate ABC transporter permease, at 6,077,027 to 6,077,938 _26690 AO356_26695: AO356_26695 - phosphate ABC transporter permease, at 6,077,938 to 6,078,903 _26695 Position (kb) 6076 6077Strain fitness (log2 ratio) -1 0 1at 6075.294 kb on - strandat 6075.485 kb on + strand, within AO356_26680at 6075.547 kb on + strand, within AO356_26680at 6075.608 kb on - strand, within AO356_26680at 6075.629 kb on + strand, within AO356_26680at 6075.630 kb on - strand, within AO356_26680at 6075.630 kb on - strand, within AO356_26680at 6075.701 kb on + strand, within AO356_26680at 6075.701 kb on + strand, within AO356_26680at 6075.701 kb on + strand, within AO356_26680at 6075.702 kb on - strand, within AO356_26680at 6075.702 kb on - strand, within AO356_26680at 6075.932 kb on + strand, within AO356_26680at 6076.086 kb on + strandat 6076.192 kb on - strandat 6076.212 kb on + strandat 6076.212 kb on + strandat 6076.212 kb on + strandat 6076.328 kb on - strand, within AO356_26685at 6076.381 kb on - strand, within AO356_26685at 6076.611 kb on - strand, within AO356_26685at 6076.611 kb on - strand, within AO356_26685at 6076.707 kb on + strand, within AO356_26685at 6076.956 kb on - strandat 6077.001 kb on - strandat 6077.029 kb on - strandat 6077.031 kb on + strandat 6077.031 kb on + strandat 6077.051 kb on - strandat 6077.062 kb on + strandat 6077.152 kb on - strand, within AO356_26690at 6077.152 kb on - strand, within AO356_26690at 6077.152 kb on - strand, within AO356_26690at 6077.208 kb on + strand, within AO356_26690at 6077.209 kb on - strand, within AO356_26690at 6077.218 kb on - strand, within AO356_26690at 6077.479 kb on + strand, within AO356_26690at 6077.506 kb on - strand, within AO356_26690at 6077.506 kb on - strand, within AO356_26690at 6077.778 kb on + strand, within AO356_26690at 6077.779 kb on - strand, within AO356_26690at 6077.779 kb on - strand, within AO356_26690at 6077.943 kb on + strandat 6077.943 kb on + strandat 6077.944 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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6,075,294 - -0.4
6,075,485 + AO356_26680 0.13 +0.4
6,075,547 + AO356_26680 0.21 -0.0
6,075,608 - AO356_26680 0.30 -0.3
6,075,629 + AO356_26680 0.33 -0.4
6,075,630 - AO356_26680 0.33 +0.1
6,075,630 - AO356_26680 0.33 +1.1
6,075,701 + AO356_26680 0.43 -0.6
6,075,701 + AO356_26680 0.43 -0.3
6,075,701 + AO356_26680 0.43 +1.2
6,075,702 - AO356_26680 0.44 +0.2
6,075,702 - AO356_26680 0.44 +0.7
6,075,932 + AO356_26680 0.77 -1.5
6,076,086 + -0.2
6,076,192 - -0.1
6,076,212 + +0.6
6,076,212 + -0.3
6,076,212 + +0.9
6,076,328 - AO356_26685 0.18 -0.1
6,076,381 - AO356_26685 0.25 +0.6
6,076,611 - AO356_26685 0.55 +0.6
6,076,611 - AO356_26685 0.55 -0.5
6,076,707 + AO356_26685 0.68 -1.3
6,076,956 - -0.1
6,077,001 - -0.0
6,077,029 - -0.3
6,077,031 + -0.3
6,077,031 + +0.2
6,077,051 - +0.1
6,077,062 + -0.3
6,077,152 - AO356_26690 0.14 -0.9
6,077,152 - AO356_26690 0.14 +0.5
6,077,152 - AO356_26690 0.14 +0.3
6,077,208 + AO356_26690 0.20 -0.0
6,077,209 - AO356_26690 0.20 -0.4
6,077,218 - AO356_26690 0.21 +0.5
6,077,479 + AO356_26690 0.50 -0.1
6,077,506 - AO356_26690 0.53 +0.6
6,077,506 - AO356_26690 0.53 +0.7
6,077,778 + AO356_26690 0.82 +0.6
6,077,779 - AO356_26690 0.82 +0.4
6,077,779 - AO356_26690 0.82 +0.4
6,077,943 + -0.2
6,077,943 + +1.0
6,077,944 - -0.3

Or see this region's nucleotide sequence