Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001302

Experiment: D-Sorbitol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Sorbitol (C)
1,452,662	+				-0.6
1,452,662	+				-1.0
1,452,663	-				-0.8
1,452,749	+				+0.2
1,452,749	+				+0.8
1,452,749	+				+0.2
1,452,749	+				-0.2
1,452,749	+				-2.0
1,452,749	+				-0.3
1,452,749	+				+0.3
1,452,749	+				-1.3
1,452,750	-				+1.0
1,452,750	-				-0.3
1,452,750	-				-0.7
1,452,750	-				+0.0
1,452,750	-				-0.8
1,452,750	-				-0.8
1,452,750	-				-0.8
1,452,798	+		ABIE53_001301	0.10	-1.6
1,452,799	-		ABIE53_001301	0.11	-0.3
1,452,839	+		ABIE53_001301	0.18	-0.6
1,452,840	+		ABIE53_001301	0.18	+0.4
1,452,840	+		ABIE53_001301	0.18	-1.3
1,452,840	+		ABIE53_001301	0.18	-1.7
1,452,840	+		ABIE53_001301	0.18	-0.3
1,452,840	+		ABIE53_001301	0.18	+2.0
1,452,840	+		ABIE53_001301	0.18	-2.3
1,452,840	+		ABIE53_001301	0.18	-0.2
1,452,840	+		ABIE53_001301	0.18	-1.4
1,452,840	+		ABIE53_001301	0.18	-1.1
1,452,841	-		ABIE53_001301	0.18	-0.7
1,452,841	-		ABIE53_001301	0.18	+1.2
1,452,841	-		ABIE53_001301	0.18	-0.8
1,452,841	-		ABIE53_001301	0.18	+3.0
1,452,841	-		ABIE53_001301	0.18	-1.7
1,452,841	-		ABIE53_001301	0.18	+1.0
1,452,841	-		ABIE53_001301	0.18	+1.4
1,452,841	-		ABIE53_001301	0.18	+0.7
1,452,873	+		ABIE53_001301	0.24	+1.0
1,452,873	+		ABIE53_001301	0.24	-0.3
1,452,873	+		ABIE53_001301	0.24	-0.6
1,452,873	+		ABIE53_001301	0.24	-0.9
1,452,954	+		ABIE53_001301	0.39	+1.7
1,452,955	-		ABIE53_001301	0.40	-0.1
1,452,984	+		ABIE53_001301	0.45	-0.4
1,452,984	+		ABIE53_001301	0.45	-0.8
1,452,984	+		ABIE53_001301	0.45	+0.2
1,452,984	+		ABIE53_001301	0.45	-0.8
1,452,984	+		ABIE53_001301	0.45	-0.9
1,452,984	+		ABIE53_001301	0.45	+2.0
1,452,984	+		ABIE53_001301	0.45	+0.0
1,452,984	+		ABIE53_001301	0.45	+0.4
1,452,984	+		ABIE53_001301	0.45	-0.3
1,452,984	+		ABIE53_001301	0.45	-0.0
1,452,985	-		ABIE53_001301	0.45	+0.1
1,452,985	-		ABIE53_001301	0.45	-0.3
1,452,985	-		ABIE53_001301	0.45	-1.7
1,452,988	+		ABIE53_001301	0.46	+2.0
1,452,988	+		ABIE53_001301	0.46	-1.7
1,452,988	+		ABIE53_001301	0.46	+1.3
1,452,988	+		ABIE53_001301	0.46	+0.7
1,452,988	+		ABIE53_001301	0.46	-1.4
1,452,989	-		ABIE53_001301	0.46	+1.0
1,452,989	-		ABIE53_001301	0.46	-0.5
1,452,989	-		ABIE53_001301	0.46	-0.2
1,452,989	-		ABIE53_001301	0.46	-1.4
1,452,989	-		ABIE53_001301	0.46	+2.0
1,452,989	-		ABIE53_001301	0.46	+0.1
1,452,989	-		ABIE53_001301	0.46	+2.1
1,452,989	-		ABIE53_001301	0.46	-1.4
1,452,989	-		ABIE53_001301	0.46	+0.4
1,452,989	-		ABIE53_001301	0.46	+0.0
1,452,989	-		ABIE53_001301	0.46	-0.5
1,452,989	-		ABIE53_001301	0.46	-0.8
1,452,989	-		ABIE53_001301	0.46	-0.2
1,453,140	+		ABIE53_001301	0.74	-0.4
1,453,388	+				+0.0
1,453,388	+				+0.4
1,453,388	+				-1.0
1,453,388	+				+0.1
1,453,388	+				+0.4
1,453,388	+				-0.4
1,453,388	+				-0.8
1,453,388	+				-1.0
1,453,389	-				+1.3
1,453,389	-				+0.4
1,453,389	-				-0.3
1,453,389	-				-0.5
1,453,389	-				+0.4
1,453,389	-				-0.1
1,453,444	+				+0.5
1,453,444	+				+1.0
1,453,445	-				+2.6
1,453,445	-				+1.0
1,453,445	-				+0.7
1,453,445	-				-1.0
1,453,445	-				+0.0
1,453,445	-				-0.1
1,453,445	-				-0.3
1,453,469	+				-0.8
1,453,470	-				+1.0
1,453,470	-				-0.3
1,453,470	-				-2.4
1,453,470	-				-0.5
1,453,507	+				+2.2
1,453,507	+				+0.0
1,453,508	-				+0.7
1,453,510	+				+0.4
1,453,510	+				+0.7
1,453,510	+				-1.4
1,453,511	-				-0.4
1,453,511	-				-0.3
1,453,533	-				-0.1
1,453,533	-				+1.8
1,453,533	-				-0.8
1,453,533	-				+0.2
1,453,533	-				-0.9
1,453,534	+				+2.0
1,453,534	+				+1.0
1,453,534	+				-1.1
1,453,535	-				+0.4
1,453,535	-				+1.3
1,453,535	-				+3.0
1,453,535	-				+0.3
1,453,535	-				+2.4
1,453,535	-				-0.1
1,453,556	+		ABIE53_001302	0.11	-0.3
1,453,556	+		ABIE53_001302	0.11	+0.5
1,453,556	+		ABIE53_001302	0.11	-1.6
1,453,556	+		ABIE53_001302	0.11	-1.4
1,453,556	+		ABIE53_001302	0.11	+0.2
1,453,557	-		ABIE53_001302	0.11	+0.6
1,453,557	-		ABIE53_001302	0.11	+2.2
1,453,557	-		ABIE53_001302	0.11	-1.3
1,453,557	-		ABIE53_001302	0.11	+0.0
1,453,711	+		ABIE53_001302	0.26	-1.3
1,453,711	+		ABIE53_001302	0.26	+0.4
1,453,711	+		ABIE53_001302	0.26	-1.9
1,453,769	+		ABIE53_001302	0.31	-0.6
1,453,865	+		ABIE53_001302	0.40	+0.4
1,453,878	+		ABIE53_001302	0.41	-2.1
1,453,879	-		ABIE53_001302	0.41	+0.7
1,453,879	-		ABIE53_001302	0.41	-2.1
1,453,900	+		ABIE53_001302	0.43	-1.9
1,453,900	+		ABIE53_001302	0.43	-0.5
1,453,900	+		ABIE53_001302	0.43	-0.6
1,453,900	+		ABIE53_001302	0.43	+0.0
1,453,900	+		ABIE53_001302	0.43	-1.1
1,453,901	-		ABIE53_001302	0.43	-0.6
1,453,901	-		ABIE53_001302	0.43	-1.2
1,453,901	-		ABIE53_001302	0.43	-2.3
1,453,904	+		ABIE53_001302	0.44	-1.7
1,453,904	+		ABIE53_001302	0.44	-0.3
1,453,905	-		ABIE53_001302	0.44	+0.1
1,453,905	-		ABIE53_001302	0.44	-0.6
1,453,917	-		ABIE53_001302	0.45	-0.6
1,453,936	+		ABIE53_001302	0.47	-0.2
1,453,936	+		ABIE53_001302	0.47	-1.4
1,453,936	+		ABIE53_001302	0.47	+0.4
1,453,936	+		ABIE53_001302	0.47	+0.0
1,453,937	-		ABIE53_001302	0.47	-0.0
1,453,937	-		ABIE53_001302	0.47	+0.6
1,453,937	-		ABIE53_001302	0.47	-0.3
1,453,937	-		ABIE53_001302	0.47	+0.0
1,453,937	-		ABIE53_001302	0.47	+1.6
1,453,946	+		ABIE53_001302	0.48	-0.9
1,453,946	+		ABIE53_001302	0.48	+0.7
1,453,947	-		ABIE53_001302	0.48	-0.6
1,454,023	+		ABIE53_001302	0.55	-1.3
1,454,023	+		ABIE53_001302	0.55	-2.4
1,454,023	+		ABIE53_001302	0.55	+2.5
1,454,023	+		ABIE53_001302	0.55	+2.8
1,454,023	+		ABIE53_001302	0.55	-0.4
1,454,023	+		ABIE53_001302	0.55	-2.1
1,454,023	+		ABIE53_001302	0.55	+0.2
1,454,023	+		ABIE53_001302	0.55	-2.0
1,454,023	+		ABIE53_001302	0.55	-0.4
1,454,023	+		ABIE53_001302	0.55	-0.3
1,454,024	-		ABIE53_001302	0.55	-0.2
1,454,024	-		ABIE53_001302	0.55	+0.9
1,454,024	-		ABIE53_001302	0.55	+0.3
1,454,024	-		ABIE53_001302	0.55	+3.0
1,454,024	-		ABIE53_001302	0.55	-0.5
1,454,025	+		ABIE53_001302	0.55	-0.4
1,454,025	+		ABIE53_001302	0.55	-2.1
1,454,025	+		ABIE53_001302	0.55	+1.0
1,454,025	+		ABIE53_001302	0.55	+1.0
1,454,026	-		ABIE53_001302	0.55	-1.5
1,454,026	-		ABIE53_001302	0.55	+0.6
1,454,045	+		ABIE53_001302	0.57	+1.0
1,454,045	+		ABIE53_001302	0.57	+2.0
1,454,045	+		ABIE53_001302	0.57	+0.3
1,454,046	-		ABIE53_001302	0.57	-2.5
1,454,046	-		ABIE53_001302	0.57	+0.0
1,454,046	-		ABIE53_001302	0.57	+2.0
1,454,046	-		ABIE53_001302	0.57	+0.4
1,454,056	+		ABIE53_001302	0.58	-0.4
1,454,057	-		ABIE53_001302	0.58	-0.7
1,454,057	-		ABIE53_001302	0.58	+0.0
1,454,062	+		ABIE53_001302	0.58	+0.2
1,454,062	+		ABIE53_001302	0.58	+0.9
1,454,070	-		ABIE53_001302	0.59	-1.0
1,454,073	+		ABIE53_001302	0.59	+0.0
1,454,073	+		ABIE53_001302	0.59	-0.3
1,454,073	+		ABIE53_001302	0.59	+3.6
1,454,074	-		ABIE53_001302	0.59	-1.6
1,454,074	-		ABIE53_001302	0.59	-1.6
1,454,103	+		ABIE53_001302	0.62	-0.7
1,454,104	-		ABIE53_001302	0.62	+0.0
1,454,104	-		ABIE53_001302	0.62	+2.3
1,454,104	-		ABIE53_001302	0.62	+0.4
1,454,158	+		ABIE53_001302	0.67	+0.0
1,454,158	+		ABIE53_001302	0.67	-0.4
1,454,159	-		ABIE53_001302	0.67	+0.1
1,454,170	+		ABIE53_001302	0.68	-0.1
1,454,170	+		ABIE53_001302	0.68	-0.9
1,454,170	+		ABIE53_001302	0.68	+1.2
1,454,170	+		ABIE53_001302	0.68	-1.0
1,454,170	+		ABIE53_001302	0.68	+1.0
1,454,170	+		ABIE53_001302	0.68	-0.4
1,454,170	+		ABIE53_001302	0.68	-1.0
1,454,171	-		ABIE53_001302	0.69	-0.3
1,454,171	-		ABIE53_001302	0.69	-1.0
1,454,171	-		ABIE53_001302	0.69	-0.8
1,454,171	-		ABIE53_001302	0.69	+1.5
1,454,171	-		ABIE53_001302	0.69	-0.4
1,454,171	-		ABIE53_001302	0.69	+2.0
1,454,186	-		ABIE53_001302	0.70	-0.4
1,454,186	-		ABIE53_001302	0.70	-1.1
1,454,194	+		ABIE53_001302	0.71	+0.8
1,454,195	-		ABIE53_001302	0.71	-1.5
1,454,195	-		ABIE53_001302	0.71	+0.6
1,454,240	+		ABIE53_001302	0.75	-0.4
1,454,241	-		ABIE53_001302	0.75	+0.0
1,454,241	-		ABIE53_001302	0.75	-0.4
1,454,243	+		ABIE53_001302	0.75	-0.2
1,454,243	+		ABIE53_001302	0.75	+3.6
1,454,244	-		ABIE53_001302	0.75	-1.0
1,454,244	-		ABIE53_001302	0.75	-0.9
1,454,250	-		ABIE53_001302	0.76	-1.8
1,454,375	+		ABIE53_001302	0.88	-0.3
1,454,375	+		ABIE53_001302	0.88	+3.0
1,454,375	+		ABIE53_001302	0.88	+0.2
1,454,375	+		ABIE53_001302	0.88	+2.8
1,454,375	+		ABIE53_001302	0.88	+0.3
1,454,375	+		ABIE53_001302	0.88	+0.2
1,454,375	+		ABIE53_001302	0.88	+1.6
1,454,375	+		ABIE53_001302	0.88	+2.4
1,454,375	+		ABIE53_001302	0.88	-0.8
1,454,376	-		ABIE53_001302	0.88	-0.9
1,454,376	-		ABIE53_001302	0.88	-0.3
1,454,376	-		ABIE53_001302	0.88	-0.1
1,454,399	+		ABIE53_001302	0.90	-0.9
1,454,399	+		ABIE53_001302	0.90	-0.7
1,454,399	+		ABIE53_001302	0.90	-0.1
1,454,400	-		ABIE53_001302	0.90	-0.7
1,454,507	+				+1.1
1,454,507	+				+1.0
1,454,507	+				+1.0
1,454,507	+				+0.4
1,454,507	+				+1.4
1,454,507	+				+0.9
1,454,507	+				-1.0
1,454,507	+				+0.4
1,454,507	+				-0.8
1,454,507	+				-0.3
1,454,507	+				+0.1
1,454,507	+				-0.5
1,454,507	+				+0.8
1,454,507	+				-2.0
1,454,507	+				+2.3
1,454,507	+				+1.0
1,454,507	+				-0.3
1,454,507	+				-1.0
1,454,508	-				+2.0
1,454,508	-				+0.8
1,454,508	-				+0.0
1,454,508	-				+1.8
1,454,508	-				+0.3
1,454,508	-				+0.2
1,454,508	-				-0.3
1,454,508	-				+2.0
1,454,508	-				-1.3
1,454,508	-				-1.5
1,454,508	-				-0.7
1,454,508	-				-1.1
1,454,508	-				+1.0
1,454,512	+				+0.0
1,454,512	+				-0.6
1,454,512	+				-1.5
1,454,512	+				-0.8
1,454,512	+				-0.9
1,454,512	+				-0.3
1,454,512	+				+0.2
1,454,513	-				-1.9
1,454,513	-				+1.0
1,454,513	-				-1.7
1,454,521	+				+0.1
1,454,522	-				+0.2
1,454,522	-				+2.0
1,454,522	-				-1.0
1,454,680	+				+3.0
1,454,680	+				+0.6
1,454,681	-				+0.4
1,454,681	-				+0.2
1,454,752	+				-0.0
1,454,752	+				+0.4
1,454,752	+				-1.1
1,454,753	-				+0.2
1,454,753	-				+0.0
1,454,777	+				-1.0
1,454,778	-				-0.4
1,455,004	+		ABIE53_001303	0.14	+2.4
1,455,004	+		ABIE53_001303	0.14	+0.3
1,455,005	-		ABIE53_001303	0.14	-2.1
1,455,245	-		ABIE53_001303	0.23	-2.1
1,455,310	+		ABIE53_001303	0.25	+0.2
1,455,310	+		ABIE53_001303	0.25	+0.9
1,455,311	-		ABIE53_001303	0.25	+0.6
1,455,311	-		ABIE53_001303	0.25	-0.8