Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_910

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
1,067,247	-		Pf6N2E2_909	0.39	-1.1
1,067,291	+		Pf6N2E2_909	0.46	+1.1
1,067,291	+		Pf6N2E2_909	0.46	-0.7
1,067,292	-		Pf6N2E2_909	0.47	+0.3
1,067,327	+		Pf6N2E2_909	0.53	+0.7
1,067,380	+		Pf6N2E2_909	0.62	-1.1
1,067,462	-		Pf6N2E2_909	0.76	-2.7
1,067,464	+		Pf6N2E2_909	0.76	+0.0
1,067,465	-		Pf6N2E2_909	0.77	+1.4
1,067,465	-		Pf6N2E2_909	0.77	-2.2
1,067,512	+		Pf6N2E2_909	0.85	-0.5
1,067,513	-		Pf6N2E2_909	0.85	-1.1
1,067,618	-				-2.6
1,067,739	+				-1.5
1,067,739	+				-3.3
1,067,739	+				-0.4
1,067,740	-				+1.1
1,067,740	-				+0.7
1,067,740	-				-2.3
1,067,844	+				-0.5
1,067,844	+				-3.5
1,067,874	-				-0.5
1,067,891	+				-3.6
1,067,904	+				-2.2
1,067,904	+				+1.3
1,067,973	+				-2.2
1,067,973	+				+0.8
1,067,974	-				+0.2
1,067,974	-				-0.7
1,067,974	-				-3.3
1,068,004	+				-1.9
1,068,009	+				-1.2
1,068,010	-				-0.1
1,068,012	+				-0.7
1,068,012	+				-0.7
1,068,012	+				+0.4
1,068,037	+				+1.6
1,068,056	+				-2.5
1,068,058	+				+0.2
1,068,059	-				+2.0
1,068,092	+				+0.6
1,068,093	-				-3.7
1,068,093	-				+0.3
1,068,123	+				+0.7
1,068,125	+				+0.9
1,068,129	+				+0.2
1,068,130	-				-0.5
1,068,238	+				+1.0
1,068,327	+				+0.6
1,068,328	-				-0.9
1,068,328	-				-4.3
1,068,328	-				+0.2
1,068,336	-				-0.9
1,068,336	-				-0.2
1,068,336	-				-1.7
1,068,339	-				-0.3
1,068,339	-				-2.5
1,068,353	+				-1.0
1,068,353	+				-0.5
1,068,353	+				-2.6
1,068,354	-				+0.4
1,068,438	+				+0.3
1,068,438	+				-2.9
1,068,438	+				-2.4
1,068,438	+				+1.6
1,068,438	+				-2.3
1,068,502	+		Pf6N2E2_910	0.11	+0.4
1,068,541	+		Pf6N2E2_910	0.13	-3.3
1,068,718	+		Pf6N2E2_910	0.19	+1.4
1,068,801	+		Pf6N2E2_910	0.21	+0.8
1,068,802	-		Pf6N2E2_910	0.21	-2.7
1,068,820	+		Pf6N2E2_910	0.22	-2.4
1,068,820	+		Pf6N2E2_910	0.22	+0.8
1,068,873	+		Pf6N2E2_910	0.24	-0.9
1,068,874	-		Pf6N2E2_910	0.24	-3.6
1,068,899	+		Pf6N2E2_910	0.25	+0.9
1,068,921	+		Pf6N2E2_910	0.25	+0.2
1,068,921	+		Pf6N2E2_910	0.25	+0.2
1,068,921	+		Pf6N2E2_910	0.25	-3.0
1,068,922	-		Pf6N2E2_910	0.25	+0.2
1,068,922	-		Pf6N2E2_910	0.25	-3.9
1,068,940	+		Pf6N2E2_910	0.26	-0.9
1,068,941	-		Pf6N2E2_910	0.26	-1.9
1,068,941	-		Pf6N2E2_910	0.26	+1.3
1,069,171	+		Pf6N2E2_910	0.34	-0.1
1,069,234	+		Pf6N2E2_910	0.36	+0.1
1,069,248	+		Pf6N2E2_910	0.36	-2.2
1,069,248	+		Pf6N2E2_910	0.36	+1.5
1,069,321	+		Pf6N2E2_910	0.39	-0.3
1,069,321	+		Pf6N2E2_910	0.39	+0.3
1,069,321	+		Pf6N2E2_910	0.39	+0.6
1,069,321	+		Pf6N2E2_910	0.39	+0.8
1,069,321	+		Pf6N2E2_910	0.39	+0.2
1,069,321	+		Pf6N2E2_910	0.39	-1.4
1,069,322	-		Pf6N2E2_910	0.39	+1.3
1,069,326	+		Pf6N2E2_910	0.39	+1.5
1,069,327	-		Pf6N2E2_910	0.39	-0.4
1,069,388	+		Pf6N2E2_910	0.41	-0.2
1,069,394	+		Pf6N2E2_910	0.41	-2.5
1,069,395	-		Pf6N2E2_910	0.41	-1.4
1,069,395	-		Pf6N2E2_910	0.41	+1.5
1,069,395	-		Pf6N2E2_910	0.41	+0.3
1,069,395	-		Pf6N2E2_910	0.41	-0.5
1,069,404	+		Pf6N2E2_910	0.42	-1.0
1,069,404	+		Pf6N2E2_910	0.42	-1.1
1,069,405	-		Pf6N2E2_910	0.42	-1.4
1,069,405	-		Pf6N2E2_910	0.42	-2.2
1,069,456	+		Pf6N2E2_910	0.43	-0.5
1,069,470	+		Pf6N2E2_910	0.44	-0.4
1,069,470	+		Pf6N2E2_910	0.44	+0.4
1,069,470	+		Pf6N2E2_910	0.44	-0.7
1,069,471	-		Pf6N2E2_910	0.44	+0.4
1,069,471	-		Pf6N2E2_910	0.44	-0.9
1,069,703	+		Pf6N2E2_910	0.52	-1.9
1,069,725	+		Pf6N2E2_910	0.52	-1.0
1,069,725	+		Pf6N2E2_910	0.52	-1.2
1,069,725	+		Pf6N2E2_910	0.52	+2.1
1,069,725	+		Pf6N2E2_910	0.52	-3.2
1,069,725	+		Pf6N2E2_910	0.52	+0.8
1,069,725	+		Pf6N2E2_910	0.52	+0.5
1,069,725	+		Pf6N2E2_910	0.52	-0.8
1,069,726	-		Pf6N2E2_910	0.52	-2.3
1,069,803	+		Pf6N2E2_910	0.55	-0.4
1,069,803	+		Pf6N2E2_910	0.55	+1.6
1,069,854	+		Pf6N2E2_910	0.57	-2.1
1,069,918	+		Pf6N2E2_910	0.59	-1.2
1,069,953	+		Pf6N2E2_910	0.60	-2.7
1,069,953	+		Pf6N2E2_910	0.60	-1.7
1,069,961	+		Pf6N2E2_910	0.60	+1.5
1,070,014	+		Pf6N2E2_910	0.62	+1.6
1,070,070	-		Pf6N2E2_910	0.64	-1.0
1,070,070	-		Pf6N2E2_910	0.64	-0.1
1,070,177	+		Pf6N2E2_910	0.67	+1.3
1,070,236	+		Pf6N2E2_910	0.69	+0.6
1,070,236	+		Pf6N2E2_910	0.69	+0.6
1,070,237	-		Pf6N2E2_910	0.69	-3.4
1,070,241	+		Pf6N2E2_910	0.69	+0.1
1,070,241	+		Pf6N2E2_910	0.69	+0.7
1,070,242	-		Pf6N2E2_910	0.70	-0.3
1,070,242	-		Pf6N2E2_910	0.70	-0.3
1,070,373	+		Pf6N2E2_910	0.74	-0.9
1,070,373	+		Pf6N2E2_910	0.74	+0.8
1,070,373	+		Pf6N2E2_910	0.74	-1.5
1,070,374	-		Pf6N2E2_910	0.74	+0.9
1,070,726	+		Pf6N2E2_910	0.86	-0.6
1,070,727	-		Pf6N2E2_910	0.86	+0.4
1,070,727	-		Pf6N2E2_910	0.86	-0.1
1,070,727	-		Pf6N2E2_910	0.86	-0.3
1,070,738	+		Pf6N2E2_910	0.86	+0.2
1,070,738	+		Pf6N2E2_910	0.86	-0.8
1,070,784	+		Pf6N2E2_910	0.88	-0.4
1,070,801	+		Pf6N2E2_910	0.88	+0.0
1,070,802	-		Pf6N2E2_910	0.88	-0.4
1,070,818	+		Pf6N2E2_910	0.89	+0.3
1,071,085	+				+0.5
1,071,138	+				+1.0
1,071,152	+				+0.5
1,071,152	+				+1.3
1,071,152	+				-1.0
1,071,153	-				+2.9
1,071,153	-				+0.3
1,071,156	+				+0.1
1,071,157	-				-0.9
1,071,213	+				-0.2
1,071,213	+				-1.5
1,071,219	+				+0.2
1,071,219	+				+0.7
1,071,219	+				+0.5
1,071,256	+				+1.3
1,071,256	+				-1.2
1,071,303	-		Pf6N2E2_911	0.26	+0.3
1,071,402	+				-2.8
1,071,403	-				-0.5
1,071,403	-				+0.1
1,071,508	-				-2.8
1,071,519	-				+0.3
1,071,546	-				-2.7
1,071,564	-				-0.9
1,071,564	-				-0.3
1,071,564	-				-0.3
1,071,599	+				-2.0
1,071,600	-				+1.4
1,071,600	-				-2.5
1,071,600	-				+0.5
1,071,600	-				+0.6
1,071,600	-				+0.3
1,071,653	-				+2.1
1,071,676	-				+0.3
1,071,691	-				-3.0
1,071,691	-				-2.8
1,071,691	-				-1.0
1,071,691	-				+0.7
1,071,715	+				-1.7
1,071,719	+				-2.4
1,071,720	-				-1.4
1,071,720	-				-0.1
1,071,720	-				-2.6
1,071,720	-				-0.3
1,071,720	-				+0.8
1,071,720	-				-0.4
1,071,720	-				-0.0
1,071,720	-				+0.2
1,071,720	-				+1.2
1,071,720	-				+0.3
1,071,720	-				+1.6
1,071,720	-				+0.6
1,071,720	-				-1.8
1,071,722	-				-2.7
1,071,722	-				+0.2
1,071,722	-				+0.3
1,071,722	-				-0.5
1,071,790	+				-2.2
1,071,790	+				-0.4
1,071,790	+				+0.7
1,071,791	-				-1.0
1,071,791	-				+0.3
1,071,846	-				-0.6
1,071,910	+				-3.6
1,071,911	-				+1.6
1,071,955	+				-0.3
1,072,036	-				-3.0
1,072,154	+		Pf6N2E2_912	0.14	+0.7