Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4170

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
4,850,647	-				+0.2
4,850,663	+				+0.1
4,850,663	+				-0.4
4,850,663	+				+1.5
4,850,688	+				+2.0
4,850,688	+				+1.3
4,850,688	+				+0.1
4,850,688	+				-0.4
4,850,771	+				-1.7
4,850,772	-				-0.2
4,850,919	+		Pf6N2E2_4169	0.30	+0.3
4,850,943	+		Pf6N2E2_4169	0.34	+0.6
4,850,943	+		Pf6N2E2_4169	0.34	+0.5
4,850,944	-		Pf6N2E2_4169	0.34	-0.6
4,850,944	-		Pf6N2E2_4169	0.34	-1.0
4,850,944	-		Pf6N2E2_4169	0.34	-0.6
4,851,188	-		Pf6N2E2_4169	0.68	-0.4
4,851,196	+		Pf6N2E2_4169	0.69	+0.1
4,851,196	+		Pf6N2E2_4169	0.69	-0.9
4,851,196	+		Pf6N2E2_4169	0.69	-0.2
4,851,246	+		Pf6N2E2_4169	0.76	+0.4
4,851,247	-		Pf6N2E2_4169	0.76	-0.1
4,851,247	-		Pf6N2E2_4169	0.76	+0.1
4,851,247	-		Pf6N2E2_4169	0.76	+0.3
4,851,247	-		Pf6N2E2_4169	0.76	-0.9
4,851,289	-		Pf6N2E2_4169	0.82	-1.1
4,851,407	+				-2.1
4,851,407	+				+0.1
4,851,407	+				-2.8
4,851,407	+				-0.2
4,851,407	+				-3.6
4,851,408	-				-0.6
4,851,414	+				-0.4
4,851,414	+				-1.1
4,851,535	+				+1.5
4,851,542	-				-3.7
4,851,702	+				-1.1
4,851,702	+				-2.8
4,851,703	-				-0.9
4,851,703	-				+0.4
4,851,717	+				-0.6
4,851,717	+				-0.6
4,851,717	+				+0.5
4,851,717	+				-1.7
4,851,717	+				-2.0
4,851,717	+				-0.9
4,851,718	-				+0.2
4,851,718	-				-3.5
4,851,718	-				+0.7
4,852,063	+		Pf6N2E2_4170	0.25	-1.3
4,852,118	-		Pf6N2E2_4170	0.28	+0.4
4,852,188	+		Pf6N2E2_4170	0.31	+0.1
4,852,233	+		Pf6N2E2_4170	0.33	+0.6
4,852,233	+		Pf6N2E2_4170	0.33	+0.1
4,852,233	+		Pf6N2E2_4170	0.33	+1.5
4,852,233	+		Pf6N2E2_4170	0.33	+0.6
4,852,233	+		Pf6N2E2_4170	0.33	+0.9
4,852,234	-		Pf6N2E2_4170	0.33	-0.3
4,852,234	-		Pf6N2E2_4170	0.33	+0.7
4,852,293	+		Pf6N2E2_4170	0.36	+0.3
4,852,293	+		Pf6N2E2_4170	0.36	-2.7
4,852,294	-		Pf6N2E2_4170	0.36	+0.7
4,852,294	-		Pf6N2E2_4170	0.36	+0.5
4,852,294	-		Pf6N2E2_4170	0.36	-3.5
4,852,389	+		Pf6N2E2_4170	0.41	+1.1
4,852,583	-		Pf6N2E2_4170	0.50	+0.1
4,852,583	-		Pf6N2E2_4170	0.50	+0.5
4,852,583	-		Pf6N2E2_4170	0.50	+0.5
4,852,583	-		Pf6N2E2_4170	0.50	+0.9
4,852,726	+		Pf6N2E2_4170	0.56	+0.7
4,852,726	+		Pf6N2E2_4170	0.56	-0.5
4,852,726	+		Pf6N2E2_4170	0.56	+0.0
4,852,726	+		Pf6N2E2_4170	0.56	+0.7
4,852,726	+		Pf6N2E2_4170	0.56	+1.1
4,852,726	+		Pf6N2E2_4170	0.56	-3.9
4,852,727	-		Pf6N2E2_4170	0.57	+0.4
4,852,727	-		Pf6N2E2_4170	0.57	-0.5
4,852,727	-		Pf6N2E2_4170	0.57	+1.5
4,852,727	-		Pf6N2E2_4170	0.57	-0.0
4,852,727	-		Pf6N2E2_4170	0.57	-0.4
4,852,727	-		Pf6N2E2_4170	0.57	-0.0
4,852,727	-		Pf6N2E2_4170	0.57	-0.7
4,852,727	-		Pf6N2E2_4170	0.57	+0.2
4,852,727	-		Pf6N2E2_4170	0.57	+0.1
4,852,727	-		Pf6N2E2_4170	0.57	+0.3
4,852,727	-		Pf6N2E2_4170	0.57	-0.1
4,852,942	+		Pf6N2E2_4170	0.67	-0.1
4,852,942	+		Pf6N2E2_4170	0.67	-0.1
4,852,942	+		Pf6N2E2_4170	0.67	+0.1
4,852,942	+		Pf6N2E2_4170	0.67	+0.8
4,852,942	+		Pf6N2E2_4170	0.67	+1.4
4,852,942	+		Pf6N2E2_4170	0.67	+0.8
4,852,943	-		Pf6N2E2_4170	0.67	+1.3
4,852,943	-		Pf6N2E2_4170	0.67	+0.2
4,852,943	-		Pf6N2E2_4170	0.67	+0.9
4,852,943	-		Pf6N2E2_4170	0.67	-0.9
4,852,943	-		Pf6N2E2_4170	0.67	+0.3
4,852,943	-		Pf6N2E2_4170	0.67	+0.5
4,852,943	-		Pf6N2E2_4170	0.67	-0.4
4,852,970	+		Pf6N2E2_4170	0.68	-2.5
4,852,970	+		Pf6N2E2_4170	0.68	+0.7
4,853,014	+		Pf6N2E2_4170	0.70	+1.3
4,853,014	+		Pf6N2E2_4170	0.70	-0.1
4,853,014	+		Pf6N2E2_4170	0.70	-0.1
4,853,014	+		Pf6N2E2_4170	0.70	-0.2
4,853,014	+		Pf6N2E2_4170	0.70	+0.0
4,853,014	+		Pf6N2E2_4170	0.70	+0.5
4,853,014	+		Pf6N2E2_4170	0.70	+1.0
4,853,014	+		Pf6N2E2_4170	0.70	+2.0
4,853,014	+		Pf6N2E2_4170	0.70	+2.1
4,853,014	+		Pf6N2E2_4170	0.70	-0.4
4,853,014	+		Pf6N2E2_4170	0.70	-0.9
4,853,015	-		Pf6N2E2_4170	0.70	+1.6
4,853,015	-		Pf6N2E2_4170	0.70	-1.5
4,853,015	-		Pf6N2E2_4170	0.70	+0.6
4,853,015	-		Pf6N2E2_4170	0.70	+0.3
4,853,015	-		Pf6N2E2_4170	0.70	-0.5
4,853,015	-		Pf6N2E2_4170	0.70	+0.5
4,853,015	-		Pf6N2E2_4170	0.70	+0.2
4,853,015	-		Pf6N2E2_4170	0.70	-1.2
4,853,185	+		Pf6N2E2_4170	0.78	+1.3
4,853,186	-		Pf6N2E2_4170	0.78	-0.1
4,853,186	-		Pf6N2E2_4170	0.78	+0.6
4,853,310	-		Pf6N2E2_4170	0.84	-1.0
4,853,346	+		Pf6N2E2_4170	0.85	+1.4
4,853,346	+		Pf6N2E2_4170	0.85	+1.2
4,853,346	+		Pf6N2E2_4170	0.85	+1.2
4,853,347	-		Pf6N2E2_4170	0.86	-0.6
4,853,347	-		Pf6N2E2_4170	0.86	+1.2
4,853,347	-		Pf6N2E2_4170	0.86	+0.7
4,853,347	-		Pf6N2E2_4170	0.86	+0.1
4,853,347	-		Pf6N2E2_4170	0.86	-0.5
4,853,358	+		Pf6N2E2_4170	0.86	-0.0
4,853,358	+		Pf6N2E2_4170	0.86	+0.4
4,853,359	-		Pf6N2E2_4170	0.86	-0.0
4,853,359	-		Pf6N2E2_4170	0.86	+0.0
4,853,359	-		Pf6N2E2_4170	0.86	-0.5
4,853,359	-		Pf6N2E2_4170	0.86	+0.8
4,853,650	+				+1.0
4,853,650	+				+0.4
4,853,746	-				-0.2
4,853,784	+				+1.5
4,853,784	+				-0.6
4,853,785	-				+0.4
4,853,832	-				+0.8
4,853,832	-				-0.0
4,853,838	+				-0.8
4,853,839	-				-1.9
4,853,861	+		Pf6N2E2_4171	0.12	+0.3
4,853,861	+		Pf6N2E2_4171	0.12	+1.5
4,853,862	-		Pf6N2E2_4171	0.12	-2.1
4,853,919	-		Pf6N2E2_4171	0.41	+0.5
4,853,919	-		Pf6N2E2_4171	0.41	+0.4
4,853,944	+		Pf6N2E2_4171	0.53	-1.1
4,853,944	+		Pf6N2E2_4171	0.53	+1.0
4,854,332	+		Pf6N2E2_4172	0.31	-1.0
4,854,515	-		Pf6N2E2_4172	0.52	+0.7