Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3859

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
4,489,726	+		Pf6N2E2_3857	0.84	+0.3
4,489,726	+		Pf6N2E2_3857	0.84	-2.3
4,489,726	+		Pf6N2E2_3857	0.84	+1.5
4,489,726	+		Pf6N2E2_3857	0.84	+0.6
4,489,726	+		Pf6N2E2_3857	0.84	+0.7
4,489,726	+		Pf6N2E2_3857	0.84	+1.1
4,489,726	+		Pf6N2E2_3857	0.84	+0.3
4,489,726	+		Pf6N2E2_3857	0.84	+1.3
4,489,726	+		Pf6N2E2_3857	0.84	-0.3
4,489,726	+		Pf6N2E2_3857	0.84	+1.6
4,489,726	+		Pf6N2E2_3857	0.84	+0.1
4,489,726	+		Pf6N2E2_3857	0.84	+0.4
4,489,726	+		Pf6N2E2_3857	0.84	-0.7
4,489,726	+		Pf6N2E2_3857	0.84	+0.9
4,489,726	+		Pf6N2E2_3857	0.84	+0.6
4,489,727	-		Pf6N2E2_3857	0.85	+0.2
4,489,727	-		Pf6N2E2_3857	0.85	+1.3
4,489,727	-		Pf6N2E2_3857	0.85	+2.2
4,489,727	-		Pf6N2E2_3857	0.85	+1.1
4,489,727	-		Pf6N2E2_3857	0.85	+0.3
4,489,727	-		Pf6N2E2_3857	0.85	+0.2
4,489,727	-		Pf6N2E2_3857	0.85	+0.9
4,489,727	-		Pf6N2E2_3857	0.85	+1.8
4,489,727	-		Pf6N2E2_3857	0.85	-0.2
4,489,727	-		Pf6N2E2_3857	0.85	+1.3
4,489,727	-		Pf6N2E2_3857	0.85	+0.9
4,489,727	-		Pf6N2E2_3857	0.85	+2.3
4,489,727	-		Pf6N2E2_3857	0.85	+1.4
4,489,727	-		Pf6N2E2_3857	0.85	+0.8
4,489,727	-		Pf6N2E2_3857	0.85	+1.1
4,489,727	-		Pf6N2E2_3857	0.85	+0.4
4,489,727	-		Pf6N2E2_3857	0.85	+0.8
4,489,729	-		Pf6N2E2_3857	0.85	+0.4
4,489,729	-		Pf6N2E2_3857	0.85	+1.2
4,489,747	+		Pf6N2E2_3857	0.88	-0.3
4,489,747	+		Pf6N2E2_3857	0.88	-0.1
4,489,748	-		Pf6N2E2_3857	0.88	+1.8
4,489,748	-		Pf6N2E2_3857	0.88	+1.4
4,489,748	-		Pf6N2E2_3857	0.88	+0.9
4,489,748	-		Pf6N2E2_3857	0.88	+1.5
4,489,824	+				+1.3
4,489,989	+		Pf6N2E2_3858	0.23	+1.6
4,489,990	-		Pf6N2E2_3858	0.23	+0.8
4,489,995	+		Pf6N2E2_3858	0.24	+1.0
4,489,995	+		Pf6N2E2_3858	0.24	-0.5
4,489,995	+		Pf6N2E2_3858	0.24	-0.3
4,489,995	+		Pf6N2E2_3858	0.24	-1.2
4,489,995	+		Pf6N2E2_3858	0.24	+1.9
4,489,995	+		Pf6N2E2_3858	0.24	+1.0
4,489,995	+		Pf6N2E2_3858	0.24	+0.6
4,489,995	+		Pf6N2E2_3858	0.24	+1.8
4,489,995	+		Pf6N2E2_3858	0.24	+0.5
4,489,995	+		Pf6N2E2_3858	0.24	+1.2
4,489,996	-		Pf6N2E2_3858	0.24	+0.2
4,489,996	-		Pf6N2E2_3858	0.24	+0.9
4,489,996	-		Pf6N2E2_3858	0.24	-1.3
4,489,996	-		Pf6N2E2_3858	0.24	+0.5
4,489,996	-		Pf6N2E2_3858	0.24	+0.2
4,489,996	-		Pf6N2E2_3858	0.24	+0.6
4,489,996	-		Pf6N2E2_3858	0.24	+2.0
4,489,996	-		Pf6N2E2_3858	0.24	+0.5
4,489,996	-		Pf6N2E2_3858	0.24	+1.4
4,489,996	-		Pf6N2E2_3858	0.24	+1.0
4,489,996	-		Pf6N2E2_3858	0.24	-0.4
4,489,996	-		Pf6N2E2_3858	0.24	+0.2
4,489,996	-		Pf6N2E2_3858	0.24	-0.3
4,489,996	-		Pf6N2E2_3858	0.24	+0.2
4,490,046	+		Pf6N2E2_3858	0.31	+0.4
4,490,046	+		Pf6N2E2_3858	0.31	+1.0
4,490,047	-		Pf6N2E2_3858	0.31	+0.6
4,490,050	-		Pf6N2E2_3858	0.32	+1.0
4,490,050	-		Pf6N2E2_3858	0.32	+0.4
4,490,154	+		Pf6N2E2_3858	0.47	+2.1
4,490,154	+		Pf6N2E2_3858	0.47	-1.2
4,490,154	+		Pf6N2E2_3858	0.47	-0.1
4,490,154	+		Pf6N2E2_3858	0.47	+0.7
4,490,155	-		Pf6N2E2_3858	0.47	+0.1
4,490,155	-		Pf6N2E2_3858	0.47	-2.3
4,490,155	-		Pf6N2E2_3858	0.47	-0.1
4,490,155	-		Pf6N2E2_3858	0.47	-1.2
4,490,253	+		Pf6N2E2_3858	0.61	+0.7
4,490,253	+		Pf6N2E2_3858	0.61	+0.2
4,490,253	+		Pf6N2E2_3858	0.61	+0.9
4,490,253	+		Pf6N2E2_3858	0.61	+1.2
4,490,253	+		Pf6N2E2_3858	0.61	+0.7
4,490,253	+		Pf6N2E2_3858	0.61	+0.3
4,490,254	-		Pf6N2E2_3858	0.61	-0.0
4,490,254	-		Pf6N2E2_3858	0.61	+1.6
4,490,254	-		Pf6N2E2_3858	0.61	+0.8
4,490,254	-		Pf6N2E2_3858	0.61	+0.7
4,490,397	+		Pf6N2E2_3858	0.82	-2.4
4,490,397	+		Pf6N2E2_3858	0.82	-0.6
4,490,398	-		Pf6N2E2_3858	0.82	+0.9
4,490,436	+		Pf6N2E2_3858	0.88	-1.0
4,490,436	+		Pf6N2E2_3858	0.88	-1.3
4,490,436	+		Pf6N2E2_3858	0.88	+0.9
4,490,437	-		Pf6N2E2_3858	0.88	+0.8
4,490,437	-		Pf6N2E2_3858	0.88	-2.5
4,490,437	-		Pf6N2E2_3858	0.88	+0.5
4,490,437	-		Pf6N2E2_3858	0.88	+1.4
4,490,451	+				+1.0
4,490,451	+				+0.9
4,490,452	-				-1.5
4,490,452	-				+1.3
4,490,455	+				+0.9
4,490,455	+				+0.9
4,490,456	-				+2.2
4,490,456	-				+0.9
4,490,456	-				+0.2
4,490,456	-				+1.4
4,490,456	-				+0.4
4,490,456	-				-0.5
4,490,456	-				+1.5
4,490,572	-				+0.2
4,490,989	+		Pf6N2E2_3859	0.39	+1.3
4,490,989	+		Pf6N2E2_3859	0.39	+1.6
4,490,989	+		Pf6N2E2_3859	0.39	+0.3
4,490,989	+		Pf6N2E2_3859	0.39	+0.6
4,490,990	-		Pf6N2E2_3859	0.39	+2.4
4,490,990	-		Pf6N2E2_3859	0.39	+0.7
4,491,068	+		Pf6N2E2_3859	0.45	-0.1
4,491,068	+		Pf6N2E2_3859	0.45	-0.3
4,491,069	-		Pf6N2E2_3859	0.45	+1.0
4,491,155	+		Pf6N2E2_3859	0.52	-0.2
4,491,155	+		Pf6N2E2_3859	0.52	+0.0
4,491,156	-		Pf6N2E2_3859	0.52	+1.5
4,491,208	+		Pf6N2E2_3859	0.56	+1.1
4,491,208	+		Pf6N2E2_3859	0.56	+1.7
4,491,209	-		Pf6N2E2_3859	0.57	+1.3
4,491,269	+		Pf6N2E2_3859	0.61	+0.1
4,491,269	+		Pf6N2E2_3859	0.61	+0.5
4,491,413	-		Pf6N2E2_3859	0.73	+0.3
4,491,497	+		Pf6N2E2_3859	0.80	+0.0
4,491,497	+		Pf6N2E2_3859	0.80	+1.3
4,491,497	+		Pf6N2E2_3859	0.80	+0.3
4,491,579	-		Pf6N2E2_3859	0.86	+0.3
4,491,656	-				-0.3
4,491,752	-				-0.0
4,491,831	+				+1.3
4,491,929	-				+0.0
4,491,929	-				+0.9
4,491,929	-				+1.2
4,491,937	-				+0.2
4,491,950	+				-0.8
4,491,951	-				-0.5
4,492,006	+				-2.4
4,492,007	-				+0.9
4,492,007	-				+1.0
4,492,007	-				+1.7
4,492,008	+				-0.1
4,492,008	+				+0.6
4,492,008	+				-1.0
4,492,008	+				+0.6
4,492,008	+				-2.3
4,492,009	-				+0.9
4,492,009	-				-0.7
4,492,009	-				-0.7
4,492,009	-				-0.9
4,492,009	-				+1.9
4,492,009	-				+0.2
4,492,009	-				+0.6
4,492,009	-				-0.6
4,492,009	-				+1.2
4,492,009	-				+0.7
4,492,023	+				+0.7
4,492,023	+				-3.0
4,492,024	-				-1.0
4,492,024	-				+0.6
4,492,101	+				-0.6
4,492,102	-				+0.7
4,492,102	-				-0.3
4,492,102	-				-0.2
4,492,102	-				-0.2
4,492,102	-				-2.2
4,492,102	-				+0.2
4,492,102	-				-0.2
4,492,142	+				-0.7
4,492,241	+		Pf6N2E2_3860	0.21	+0.1
4,492,242	-		Pf6N2E2_3860	0.22	+1.8
4,492,242	-		Pf6N2E2_3860	0.22	-3.7
4,492,242	-		Pf6N2E2_3860	0.22	+0.5
4,492,244	+		Pf6N2E2_3860	0.22	+0.4
4,492,244	+		Pf6N2E2_3860	0.22	-0.7
4,492,244	+		Pf6N2E2_3860	0.22	-3.9
4,492,244	+		Pf6N2E2_3860	0.22	+0.2
4,492,244	+		Pf6N2E2_3860	0.22	+1.1
4,492,245	-		Pf6N2E2_3860	0.22	-0.5
4,492,325	+		Pf6N2E2_3860	0.32	-0.5
4,492,325	+		Pf6N2E2_3860	0.32	+0.5
4,492,326	-		Pf6N2E2_3860	0.32	+0.1
4,492,326	-		Pf6N2E2_3860	0.32	-0.1
4,492,326	-		Pf6N2E2_3860	0.32	+0.3
4,492,326	-		Pf6N2E2_3860	0.32	-0.1
4,492,326	-		Pf6N2E2_3860	0.32	-0.6
4,492,357	-		Pf6N2E2_3860	0.36	+1.3
4,492,451	+		Pf6N2E2_3860	0.47	+0.9
4,492,451	+		Pf6N2E2_3860	0.47	-0.7
4,492,616	+		Pf6N2E2_3860	0.67	-1.1
4,492,617	-		Pf6N2E2_3860	0.67	-3.9
4,492,649	+		Pf6N2E2_3860	0.71	+2.0
4,492,649	+		Pf6N2E2_3860	0.71	-1.1
4,492,649	+		Pf6N2E2_3860	0.71	+0.5
4,492,650	-		Pf6N2E2_3860	0.71	-1.6
4,492,650	-		Pf6N2E2_3860	0.71	+0.2
4,492,650	-		Pf6N2E2_3860	0.71	+0.4
4,492,650	-		Pf6N2E2_3860	0.71	+0.9
4,492,650	-		Pf6N2E2_3860	0.71	-0.7
4,492,650	-		Pf6N2E2_3860	0.71	+1.0
4,492,650	-		Pf6N2E2_3860	0.71	+0.1
4,492,650	-		Pf6N2E2_3860	0.71	-2.1
4,492,650	-		Pf6N2E2_3860	0.71	+1.2
4,492,650	-		Pf6N2E2_3860	0.71	+1.2
4,492,652	+		Pf6N2E2_3860	0.71	+0.4
4,492,652	+		Pf6N2E2_3860	0.71	+0.5
4,492,652	+		Pf6N2E2_3860	0.71	-2.0
4,492,652	+		Pf6N2E2_3860	0.71	-1.3
4,492,653	-		Pf6N2E2_3860	0.71	+1.0
4,492,653	-		Pf6N2E2_3860	0.71	+0.7
4,492,653	-		Pf6N2E2_3860	0.71	+0.9