Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3309

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
3,821,562	+		Pf6N2E2_3308	0.51	+0.3
3,821,563	-		Pf6N2E2_3308	0.51	-2.6
3,821,563	-		Pf6N2E2_3308	0.51	+1.1
3,821,625	-		Pf6N2E2_3308	0.55	+0.9
3,821,625	-		Pf6N2E2_3308	0.55	-0.7
3,821,633	+		Pf6N2E2_3308	0.55	-1.8
3,821,633	+		Pf6N2E2_3308	0.55	-4.8
3,821,633	+		Pf6N2E2_3308	0.55	-3.1
3,821,633	+		Pf6N2E2_3308	0.55	-3.6
3,821,633	+		Pf6N2E2_3308	0.55	-2.3
3,821,633	+		Pf6N2E2_3308	0.55	-1.5
3,821,634	-		Pf6N2E2_3308	0.55	-0.7
3,821,634	-		Pf6N2E2_3308	0.55	+1.3
3,821,635	+		Pf6N2E2_3308	0.55	-2.1
3,821,635	+		Pf6N2E2_3308	0.55	-3.7
3,821,635	+		Pf6N2E2_3308	0.55	-3.5
3,821,636	-		Pf6N2E2_3308	0.55	+0.7
3,821,636	-		Pf6N2E2_3308	0.55	+1.1
3,821,636	-		Pf6N2E2_3308	0.55	+0.3
3,821,636	-		Pf6N2E2_3308	0.55	+1.3
3,821,724	-		Pf6N2E2_3308	0.61	+0.6
3,821,777	+		Pf6N2E2_3308	0.64	-2.1
3,821,804	+		Pf6N2E2_3308	0.66	-4.5
3,821,804	+		Pf6N2E2_3308	0.66	-3.3
3,821,804	+		Pf6N2E2_3308	0.66	-3.8
3,821,804	+		Pf6N2E2_3308	0.66	-3.3
3,821,805	-		Pf6N2E2_3308	0.66	-3.0
3,821,897	+		Pf6N2E2_3308	0.72	-3.7
3,821,898	-		Pf6N2E2_3308	0.72	+1.1
3,821,898	-		Pf6N2E2_3308	0.72	-0.3
3,821,979	-		Pf6N2E2_3308	0.77	-2.4
3,821,993	+		Pf6N2E2_3308	0.78	-4.2
3,821,993	+		Pf6N2E2_3308	0.78	-3.5
3,821,993	+		Pf6N2E2_3308	0.78	-4.1
3,821,994	-		Pf6N2E2_3308	0.78	-1.4
3,821,994	-		Pf6N2E2_3308	0.78	+0.5
3,821,994	-		Pf6N2E2_3308	0.78	+0.6
3,821,994	-		Pf6N2E2_3308	0.78	+0.5
3,821,994	-		Pf6N2E2_3308	0.78	+0.8
3,822,086	+		Pf6N2E2_3308	0.83	-2.4
3,822,086	+		Pf6N2E2_3308	0.83	-4.9
3,822,116	+		Pf6N2E2_3308	0.85	-2.3
3,822,116	+		Pf6N2E2_3308	0.85	-3.9
3,822,116	+		Pf6N2E2_3308	0.85	-2.4
3,822,117	-		Pf6N2E2_3308	0.85	+0.1
3,822,117	-		Pf6N2E2_3308	0.85	+0.3
3,822,140	+		Pf6N2E2_3308	0.87	-4.3
3,822,200	+				-5.3
3,822,460	-				+1.5
3,822,545	-				+0.9
3,822,583	-				+2.3
3,822,662	-		Pf6N2E2_3309	0.10	+0.5
3,822,662	-		Pf6N2E2_3309	0.10	+0.7
3,822,700	-		Pf6N2E2_3309	0.13	-0.0
3,822,726	-		Pf6N2E2_3309	0.15	-0.2
3,822,738	+		Pf6N2E2_3309	0.16	-0.7
3,822,739	-		Pf6N2E2_3309	0.16	-0.3
3,822,739	-		Pf6N2E2_3309	0.16	+0.1
3,822,739	-		Pf6N2E2_3309	0.16	+0.4
3,822,807	+		Pf6N2E2_3309	0.21	-0.2
3,822,808	-		Pf6N2E2_3309	0.21	+0.5
3,822,808	-		Pf6N2E2_3309	0.21	+0.8
3,822,808	-		Pf6N2E2_3309	0.21	+1.6
3,822,830	+		Pf6N2E2_3309	0.22	-2.4
3,822,831	-		Pf6N2E2_3309	0.22	+1.4
3,822,861	+		Pf6N2E2_3309	0.25	-0.4
3,822,862	-		Pf6N2E2_3309	0.25	+1.2
3,823,243	-		Pf6N2E2_3309	0.52	+1.3
3,823,243	-		Pf6N2E2_3309	0.52	-1.1
3,823,308	+		Pf6N2E2_3309	0.57	-2.7
3,823,309	-		Pf6N2E2_3309	0.57	+0.8
3,823,311	+		Pf6N2E2_3309	0.57	+0.4
3,823,312	-		Pf6N2E2_3309	0.57	+1.3
3,823,312	-		Pf6N2E2_3309	0.57	-0.4
3,823,312	-		Pf6N2E2_3309	0.57	+1.1
3,823,330	+		Pf6N2E2_3309	0.59	+0.2
3,823,331	-		Pf6N2E2_3309	0.59	+1.1
3,823,331	-		Pf6N2E2_3309	0.59	+1.0
3,823,331	-		Pf6N2E2_3309	0.59	-0.1
3,823,374	+		Pf6N2E2_3309	0.62	+0.8
3,823,374	+		Pf6N2E2_3309	0.62	+0.5
3,823,374	+		Pf6N2E2_3309	0.62	+0.2
3,823,375	-		Pf6N2E2_3309	0.62	+0.3
3,823,375	-		Pf6N2E2_3309	0.62	+0.9
3,823,378	-		Pf6N2E2_3309	0.62	+1.0
3,823,431	+		Pf6N2E2_3309	0.66	+0.8
3,823,432	-		Pf6N2E2_3309	0.66	-2.0
3,823,432	-		Pf6N2E2_3309	0.66	+1.1
3,823,432	-		Pf6N2E2_3309	0.66	-0.6
3,823,432	-		Pf6N2E2_3309	0.66	+0.2
3,823,432	-		Pf6N2E2_3309	0.66	-1.3
3,823,483	-		Pf6N2E2_3309	0.70	-0.2
3,823,506	+		Pf6N2E2_3309	0.71	-4.3
3,823,506	+		Pf6N2E2_3309	0.71	+0.7
3,823,507	-		Pf6N2E2_3309	0.71	+1.1
3,823,515	+		Pf6N2E2_3309	0.72	+0.9
3,823,515	+		Pf6N2E2_3309	0.72	-0.3
3,823,539	+		Pf6N2E2_3309	0.74	+0.1
3,823,539	+		Pf6N2E2_3309	0.74	+0.4
3,823,539	+		Pf6N2E2_3309	0.74	-0.8
3,823,540	-		Pf6N2E2_3309	0.74	+0.4
3,823,540	-		Pf6N2E2_3309	0.74	+0.2
3,823,653	+		Pf6N2E2_3309	0.82	-4.4
3,823,653	+		Pf6N2E2_3309	0.82	+1.1
3,823,653	+		Pf6N2E2_3309	0.82	+1.0
3,823,653	+		Pf6N2E2_3309	0.82	+0.4
3,823,654	-		Pf6N2E2_3309	0.82	-2.0
3,823,654	-		Pf6N2E2_3309	0.82	-1.2
3,823,654	-		Pf6N2E2_3309	0.82	+1.2
3,823,654	-		Pf6N2E2_3309	0.82	+0.7
3,823,654	-		Pf6N2E2_3309	0.82	+2.0
3,823,689	+		Pf6N2E2_3309	0.85	+0.3
3,823,689	+		Pf6N2E2_3309	0.85	-3.7
3,823,689	+		Pf6N2E2_3309	0.85	+0.0
3,823,690	-		Pf6N2E2_3309	0.85	+0.6
3,823,690	-		Pf6N2E2_3309	0.85	-0.5
3,823,690	-		Pf6N2E2_3309	0.85	+1.1
3,823,690	-		Pf6N2E2_3309	0.85	+0.2
3,823,690	-		Pf6N2E2_3309	0.85	+1.2
3,823,690	-		Pf6N2E2_3309	0.85	+2.0
3,823,690	-		Pf6N2E2_3309	0.85	+0.9
3,823,741	-		Pf6N2E2_3309	0.88	-2.0
3,823,764	+				-4.8
3,823,765	-				-0.1
3,823,771	+				+1.7
3,823,772	-				+1.2
3,823,812	+				-0.5
3,823,813	-				-0.2
3,823,899	+				+0.2
3,824,101	-				+1.0
3,824,101	-				+0.7
3,824,232	+		Pf6N2E2_3310	0.16	-3.1
3,824,232	+		Pf6N2E2_3310	0.16	-0.6
3,824,232	+		Pf6N2E2_3310	0.16	+0.9
3,824,233	-		Pf6N2E2_3310	0.16	+0.8
3,824,233	-		Pf6N2E2_3310	0.16	+0.3
3,824,277	+		Pf6N2E2_3310	0.19	-1.0
3,824,277	+		Pf6N2E2_3310	0.19	-1.1
3,824,278	-		Pf6N2E2_3310	0.19	+1.8
3,824,278	-		Pf6N2E2_3310	0.19	-3.3
3,824,278	-		Pf6N2E2_3310	0.19	-0.5
3,824,385	+		Pf6N2E2_3310	0.26	-3.1
3,824,386	-		Pf6N2E2_3310	0.26	+0.4
3,824,614	-		Pf6N2E2_3310	0.40	-0.1
3,824,656	-		Pf6N2E2_3310	0.43	+0.9
3,824,656	-		Pf6N2E2_3310	0.43	+1.1
3,824,760	+		Pf6N2E2_3310	0.49	+0.3
3,824,841	+		Pf6N2E2_3310	0.54	+1.4
3,824,856	-		Pf6N2E2_3310	0.55	-2.2
3,824,856	-		Pf6N2E2_3310	0.55	+0.3
3,824,856	-		Pf6N2E2_3310	0.55	+1.3
3,824,868	+		Pf6N2E2_3310	0.56	-0.4
3,824,868	+		Pf6N2E2_3310	0.56	+1.5
3,824,868	+		Pf6N2E2_3310	0.56	+0.0
3,824,869	-		Pf6N2E2_3310	0.56	+0.6
3,824,869	-		Pf6N2E2_3310	0.56	+1.1
3,824,869	-		Pf6N2E2_3310	0.56	+1.0
3,824,869	-		Pf6N2E2_3310	0.56	+0.5
3,824,869	-		Pf6N2E2_3310	0.56	+0.4
3,824,869	-		Pf6N2E2_3310	0.56	+1.3
3,824,869	-		Pf6N2E2_3310	0.56	-1.2
3,824,869	-		Pf6N2E2_3310	0.56	+1.6