Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_794 and Pf1N1B4_795 are separated by 406 nucleotides Pf1N1B4_795 and Pf1N1B4_796 are separated by 8 nucleotides
Pf1N1B4_794 - Signal transduction histidine kinase, at 906,483 to 907,886
_794
Pf1N1B4_795 - hypothetical protein, at 908,293 to 908,577
_795
Pf1N1B4_796 - putative membrane protein, at 908,586 to 910,139
_796
Position (kb) 908
909 Strain fitness (log2 ratio) -2
-1
0
1
2 at 907.494 kb on + strand, within Pf1N1B4_794 at 907.494 kb on + strand, within Pf1N1B4_794 at 907.494 kb on + strand, within Pf1N1B4_794 at 907.495 kb on - strand, within Pf1N1B4_794 at 907.684 kb on + strand, within Pf1N1B4_794 at 907.684 kb on + strand, within Pf1N1B4_794 at 907.684 kb on + strand, within Pf1N1B4_794 at 907.684 kb on + strand, within Pf1N1B4_794 at 907.684 kb on + strand, within Pf1N1B4_794 at 907.684 kb on + strand at 907.684 kb on + strand, within Pf1N1B4_794 at 907.684 kb on + strand, within Pf1N1B4_794 at 907.684 kb on + strand, within Pf1N1B4_794 at 907.684 kb on + strand, within Pf1N1B4_794 at 907.684 kb on + strand, within Pf1N1B4_794 at 907.685 kb on - strand, within Pf1N1B4_794 at 907.685 kb on - strand, within Pf1N1B4_794 at 907.685 kb on - strand, within Pf1N1B4_794 at 907.685 kb on - strand, within Pf1N1B4_794 at 907.685 kb on - strand, within Pf1N1B4_794 at 907.685 kb on - strand, within Pf1N1B4_794 at 907.685 kb on - strand, within Pf1N1B4_794 at 907.685 kb on - strand, within Pf1N1B4_794 at 907.685 kb on - strand, within Pf1N1B4_794 at 907.685 kb on - strand at 907.689 kb on - strand, within Pf1N1B4_794 at 907.728 kb on + strand, within Pf1N1B4_794 at 907.729 kb on - strand, within Pf1N1B4_794 at 907.729 kb on - strand, within Pf1N1B4_794 at 907.779 kb on + strand at 907.779 kb on + strand at 907.780 kb on - strand at 907.780 kb on - strand at 907.808 kb on + strand at 907.809 kb on - strand at 907.884 kb on + strand at 907.884 kb on + strand at 907.885 kb on - strand at 907.885 kb on - strand at 907.914 kb on + strand at 907.915 kb on - strand at 907.915 kb on - strand at 908.099 kb on + strand at 908.207 kb on + strand at 908.208 kb on - strand at 908.237 kb on + strand at 908.237 kb on + strand at 908.237 kb on + strand at 908.237 kb on + strand at 908.237 kb on + strand at 908.238 kb on - strand at 908.238 kb on - strand at 908.238 kb on - strand at 908.238 kb on - strand at 908.238 kb on - strand at 908.238 kb on - strand at 908.238 kb on - strand at 908.238 kb on - strand at 908.238 kb on - strand at 908.238 kb on - strand at 908.238 kb on - strand at 908.238 kb on - strand at 908.238 kb on - strand at 908.238 kb on - strand at 908.264 kb on + strand at 908.264 kb on + strand at 908.264 kb on + strand at 908.265 kb on - strand at 908.265 kb on - strand at 908.265 kb on - strand at 908.265 kb on - strand at 908.265 kb on - strand at 908.265 kb on - strand at 908.265 kb on - strand at 908.265 kb on - strand at 908.269 kb on - strand at 908.304 kb on - strand at 908.332 kb on + strand, within Pf1N1B4_795 at 908.332 kb on + strand, within Pf1N1B4_795 at 908.333 kb on - strand, within Pf1N1B4_795 at 908.405 kb on - strand at 908.442 kb on + strand, within Pf1N1B4_795 at 908.442 kb on + strand, within Pf1N1B4_795 at 908.443 kb on - strand, within Pf1N1B4_795 at 908.443 kb on - strand, within Pf1N1B4_795 at 908.443 kb on - strand at 908.443 kb on - strand, within Pf1N1B4_795 at 908.443 kb on - strand, within Pf1N1B4_795 at 908.550 kb on + strand at 908.550 kb on + strand at 908.550 kb on + strand at 908.551 kb on - strand at 908.551 kb on - strand at 908.551 kb on - strand at 908.551 kb on - strand at 908.551 kb on - strand at 908.851 kb on + strand, within Pf1N1B4_796 at 908.851 kb on + strand, within Pf1N1B4_796 at 908.851 kb on + strand, within Pf1N1B4_796 at 908.851 kb on + strand, within Pf1N1B4_796 at 908.853 kb on + strand, within Pf1N1B4_796 at 908.854 kb on - strand, within Pf1N1B4_796 at 908.881 kb on + strand, within Pf1N1B4_796 at 908.881 kb on - strand, within Pf1N1B4_796 at 908.882 kb on - strand, within Pf1N1B4_796 at 908.882 kb on - strand, within Pf1N1B4_796 at 908.884 kb on + strand, within Pf1N1B4_796 at 908.884 kb on + strand, within Pf1N1B4_796 at 908.885 kb on - strand, within Pf1N1B4_796 at 908.885 kb on - strand, within Pf1N1B4_796 at 908.888 kb on + strand at 908.888 kb on + strand, within Pf1N1B4_796 at 908.888 kb on + strand, within Pf1N1B4_796 at 908.888 kb on + strand, within Pf1N1B4_796 at 908.889 kb on - strand, within Pf1N1B4_796 at 908.899 kb on + strand, within Pf1N1B4_796 at 908.899 kb on + strand, within Pf1N1B4_796 at 908.899 kb on + strand at 908.905 kb on + strand, within Pf1N1B4_796 at 908.940 kb on + strand, within Pf1N1B4_796 at 908.940 kb on + strand, within Pf1N1B4_796 at 908.940 kb on + strand, within Pf1N1B4_796 at 909.045 kb on + strand, within Pf1N1B4_796 at 909.045 kb on + strand, within Pf1N1B4_796 at 909.045 kb on + strand, within Pf1N1B4_796 at 909.045 kb on + strand, within Pf1N1B4_796 at 909.046 kb on - strand at 909.470 kb on - strand, within Pf1N1B4_796
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 907,494 + Pf1N1B4_794 0.72 -1.3 907,494 + Pf1N1B4_794 0.72 +0.1 907,494 + Pf1N1B4_794 0.72 +0.3 907,495 - Pf1N1B4_794 0.72 +0.2 907,684 + Pf1N1B4_794 0.86 -1.4 907,684 + Pf1N1B4_794 0.86 +0.7 907,684 + Pf1N1B4_794 0.86 +0.3 907,684 + Pf1N1B4_794 0.86 +1.4 907,684 + Pf1N1B4_794 0.86 +0.4 907,684 + -0.9 907,684 + Pf1N1B4_794 0.86 -0.3 907,684 + Pf1N1B4_794 0.86 -0.5 907,684 + Pf1N1B4_794 0.86 +0.2 907,684 + Pf1N1B4_794 0.86 +1.9 907,684 + Pf1N1B4_794 0.86 -0.1 907,685 - Pf1N1B4_794 0.86 +0.6 907,685 - Pf1N1B4_794 0.86 +0.7 907,685 - Pf1N1B4_794 0.86 -0.1 907,685 - Pf1N1B4_794 0.86 -0.6 907,685 - Pf1N1B4_794 0.86 -0.0 907,685 - Pf1N1B4_794 0.86 +0.9 907,685 - Pf1N1B4_794 0.86 -1.2 907,685 - Pf1N1B4_794 0.86 -0.6 907,685 - Pf1N1B4_794 0.86 -2.0 907,685 - -0.2 907,689 - Pf1N1B4_794 0.86 -1.0 907,728 + Pf1N1B4_794 0.89 -0.5 907,729 - Pf1N1B4_794 0.89 +0.7 907,729 - Pf1N1B4_794 0.89 +0.4 907,779 + -0.8 907,779 + +0.8 907,780 - -0.0 907,780 - -1.7 907,808 + +0.1 907,809 - -1.2 907,884 + +0.5 907,884 + -1.0 907,885 - -1.3 907,885 - -0.9 907,914 + -0.2 907,915 - -0.9 907,915 - -0.4 908,099 + -0.8 908,207 + +0.1 908,208 - +0.8 908,237 + -0.8 908,237 + +0.7 908,237 + +0.3 908,237 + -0.5 908,237 + +1.1 908,238 - -1.0 908,238 - -0.8 908,238 - +0.3 908,238 - +1.1 908,238 - +0.1 908,238 - +0.3 908,238 - -0.1 908,238 - -0.5 908,238 - -0.2 908,238 - -0.1 908,238 - +0.7 908,238 - -0.9 908,238 - -0.3 908,238 - +0.4 908,264 + +0.1 908,264 + +0.7 908,264 + -1.5 908,265 - +0.1 908,265 - -0.5 908,265 - +1.4 908,265 - +1.4 908,265 - +1.1 908,265 - +1.1 908,265 - -0.5 908,265 - +1.8 908,269 - -0.7 908,304 - -0.5 908,332 + Pf1N1B4_795 0.14 +0.1 908,332 + Pf1N1B4_795 0.14 -1.1 908,333 - Pf1N1B4_795 0.14 -0.5 908,405 - +1.9 908,442 + Pf1N1B4_795 0.52 -0.6 908,442 + Pf1N1B4_795 0.52 -0.6 908,443 - Pf1N1B4_795 0.53 +0.1 908,443 - Pf1N1B4_795 0.53 -0.9 908,443 - +1.1 908,443 - Pf1N1B4_795 0.53 -1.7 908,443 - Pf1N1B4_795 0.53 -1.2 908,550 + +0.1 908,550 + +0.2 908,550 + +0.6 908,551 - +0.7 908,551 - +0.9 908,551 - +1.1 908,551 - +0.2 908,551 - +0.7 908,851 + Pf1N1B4_796 0.17 -1.5 908,851 + Pf1N1B4_796 0.17 +0.3 908,851 + Pf1N1B4_796 0.17 -0.5 908,851 + Pf1N1B4_796 0.17 +0.1 908,853 + Pf1N1B4_796 0.17 +0.3 908,854 - Pf1N1B4_796 0.17 +0.1 908,881 + Pf1N1B4_796 0.19 +1.8 908,881 - Pf1N1B4_796 0.19 -1.2 908,882 - Pf1N1B4_796 0.19 +0.7 908,882 - Pf1N1B4_796 0.19 +0.4 908,884 + Pf1N1B4_796 0.19 +0.1 908,884 + Pf1N1B4_796 0.19 +0.1 908,885 - Pf1N1B4_796 0.19 +1.1 908,885 - Pf1N1B4_796 0.19 +0.3 908,888 + -0.9 908,888 + Pf1N1B4_796 0.19 -0.5 908,888 + Pf1N1B4_796 0.19 -0.2 908,888 + Pf1N1B4_796 0.19 -0.6 908,889 - Pf1N1B4_796 0.19 -0.0 908,899 + Pf1N1B4_796 0.20 -0.1 908,899 + Pf1N1B4_796 0.20 -0.2 908,899 + +2.1 908,905 + Pf1N1B4_796 0.21 +0.6 908,940 + Pf1N1B4_796 0.23 +0.9 908,940 + Pf1N1B4_796 0.23 -0.9 908,940 + Pf1N1B4_796 0.23 +0.4 909,045 + Pf1N1B4_796 0.30 +0.7 909,045 + Pf1N1B4_796 0.30 +0.2 909,045 + Pf1N1B4_796 0.30 -1.2 909,045 + Pf1N1B4_796 0.30 -0.8 909,046 - -1.7 909,470 - Pf1N1B4_796 0.57 -0.9
Or see this region's nucleotide sequence