Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3154

Experiment: Cholin acetate 40 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 40 mM
3,292,462	+		Ga0059261_3150	0.84	+0.4
3,292,463	-		Ga0059261_3150	0.85	-0.2
3,292,463	-		Ga0059261_3150	0.85	-0.5
3,292,678	+		Ga0059261_3151	0.24	+0.4
3,292,678	+		Ga0059261_3151	0.24	-1.3
3,292,678	+		Ga0059261_3151	0.24	-0.6
3,292,678	+		Ga0059261_3151	0.24	+0.2
3,292,678	+		Ga0059261_3151	0.24	-0.7
3,292,678	+		Ga0059261_3151	0.24	-0.1
3,292,679	-		Ga0059261_3151	0.24	+0.4
3,292,679	-		Ga0059261_3151	0.24	-0.3
3,292,679	-		Ga0059261_3151	0.24	-1.0
3,292,679	-		Ga0059261_3151	0.24	-0.2
3,292,679	-		Ga0059261_3151	0.24	+1.2
3,292,679	-		Ga0059261_3151	0.24	+0.2
3,292,684	+		Ga0059261_3151	0.26	+0.8
3,292,684	+		Ga0059261_3151	0.26	-0.8
3,292,684	+		Ga0059261_3151	0.26	+0.7
3,292,684	+		Ga0059261_3151	0.26	+0.0
3,292,684	+		Ga0059261_3151	0.26	-0.9
3,292,684	+		Ga0059261_3151	0.26	+0.1
3,292,685	-		Ga0059261_3151	0.26	-0.2
3,292,685	-		Ga0059261_3151	0.26	+0.3
3,292,685	-		Ga0059261_3151	0.26	+0.2
3,292,768	+		Ga0059261_3151	0.57	-0.2
3,292,768	+		Ga0059261_3151	0.57	-0.1
3,292,768	+		Ga0059261_3151	0.57	+0.4
3,292,768	+		Ga0059261_3151	0.57	+0.1
3,292,768	+		Ga0059261_3151	0.57	+0.8
3,292,768	+		Ga0059261_3151	0.57	-0.6
3,292,768	+		Ga0059261_3151	0.57	-0.5
3,292,768	+		Ga0059261_3151	0.57	-0.3
3,292,769	-		Ga0059261_3151	0.57	-1.0
3,292,769	-		Ga0059261_3151	0.57	-0.1
3,292,769	-		Ga0059261_3151	0.57	+0.2
3,292,816	+		Ga0059261_3151	0.75	-0.3
3,292,816	+		Ga0059261_3151	0.75	+0.7
3,292,817	-		Ga0059261_3151	0.75	-0.6
3,292,822	+		Ga0059261_3151	0.77	-0.1
3,292,822	+		Ga0059261_3151	0.77	-1.6
3,292,822	+		Ga0059261_3151	0.77	+0.3
3,292,823	-		Ga0059261_3151	0.77	+0.2
3,292,823	-		Ga0059261_3151	0.77	-0.7
3,292,823	-		Ga0059261_3151	0.77	+0.2
3,292,823	-		Ga0059261_3151	0.77	-0.4
3,292,843	+		Ga0059261_3151	0.85	-0.2
3,292,843	+		Ga0059261_3151	0.85	-0.3
3,292,843	+		Ga0059261_3151	0.85	+1.0
3,293,010	+				+0.1
3,293,010	+				-0.5
3,293,011	-				+0.0
3,293,011	-				-0.1
3,293,011	-				+0.7
3,293,224	+				-1.4
3,293,224	+				-0.6
3,293,224	+				-0.4
3,293,224	+				-0.5
3,293,224	+				-1.2
3,293,224	+				+0.7
3,293,224	+				-0.4
3,293,224	+				+0.3
3,293,225	-				+0.0
3,293,225	-				-0.5
3,293,225	-				+0.5
3,293,225	-				+0.8
3,293,225	-				-0.2
3,293,389	+		Ga0059261_3153	0.76	+0.7
3,293,390	-		Ga0059261_3153	0.76	-0.6
3,293,390	-		Ga0059261_3153	0.76	-0.8
3,293,390	-		Ga0059261_3153	0.76	-0.2
3,293,390	-		Ga0059261_3153	0.76	+0.0
3,293,390	-		Ga0059261_3153	0.76	-0.6
3,293,390	-		Ga0059261_3153	0.76	-0.8
3,293,390	-		Ga0059261_3153	0.76	+1.0
3,293,456	+				+0.3
3,293,456	+				+0.6
3,293,463	-				+0.2
3,293,699	+		Ga0059261_3154	0.27	+0.0
3,293,700	-		Ga0059261_3154	0.27	-0.8
3,293,700	-		Ga0059261_3154	0.27	-0.3
3,293,838	-		Ga0059261_3154	0.43	-0.0
3,294,014	-		Ga0059261_3154	0.63	-0.3
3,294,025	-		Ga0059261_3154	0.64	-0.6
3,294,079	-		Ga0059261_3154	0.70	-0.2
3,294,098	+		Ga0059261_3154	0.72	-0.1
3,294,099	-		Ga0059261_3154	0.72	-0.2
3,294,099	-		Ga0059261_3154	0.72	-0.4
3,294,099	-		Ga0059261_3154	0.72	+0.6
3,294,099	-		Ga0059261_3154	0.72	-0.2
3,294,099	-		Ga0059261_3154	0.72	+0.3
3,294,099	-		Ga0059261_3154	0.72	-0.7
3,294,146	+		Ga0059261_3154	0.77	-0.9
3,294,147	-		Ga0059261_3154	0.77	-0.5
3,294,147	-		Ga0059261_3154	0.77	-0.2
3,294,147	-		Ga0059261_3154	0.77	+0.0
3,294,147	-		Ga0059261_3154	0.77	-0.2
3,294,147	-		Ga0059261_3154	0.77	-0.2
3,294,281	+				+0.1
3,294,458	+				-0.1
3,294,458	+				-0.0
3,294,459	-				-0.2
3,294,459	-				-0.0
3,294,459	-				+0.1
3,294,542	+				+0.3
3,294,542	+				+0.3
3,294,542	+				+0.1
3,294,543	-				+0.0
3,294,543	-				-0.1
3,294,543	-				+0.4
3,294,665	-		Ga0059261_3155	0.16	-1.6
3,294,688	+		Ga0059261_3155	0.18	-0.2
3,294,688	+				+2.8
3,294,688	+		Ga0059261_3155	0.18	-2.2
3,294,688	+		Ga0059261_3155	0.18	-0.9
3,294,689	-		Ga0059261_3155	0.18	+0.2
3,294,689	-		Ga0059261_3155	0.18	+1.6
3,294,689	-		Ga0059261_3155	0.18	-0.2
3,294,689	-		Ga0059261_3155	0.18	-0.3
3,294,727	+		Ga0059261_3155	0.22	-0.3
3,294,727	+		Ga0059261_3155	0.22	+0.7
3,294,727	+		Ga0059261_3155	0.22	-0.3
3,294,727	+		Ga0059261_3155	0.22	-0.9
3,294,727	+		Ga0059261_3155	0.22	+0.3
3,294,727	+				+0.3
3,294,728	-		Ga0059261_3155	0.22	+0.5
3,294,728	-		Ga0059261_3155	0.22	+0.3
3,294,728	-		Ga0059261_3155	0.22	+0.2
3,294,807	-		Ga0059261_3155	0.30	+0.0
3,294,807	-		Ga0059261_3155	0.30	-0.6
3,294,807	-		Ga0059261_3155	0.30	-0.3
3,294,865	+		Ga0059261_3155	0.36	-0.2
3,294,865	+		Ga0059261_3155	0.36	+0.0
3,294,865	+		Ga0059261_3155	0.36	-0.8
3,294,865	+		Ga0059261_3155	0.36	+0.4
3,294,866	-		Ga0059261_3155	0.36	-1.6
3,294,866	-		Ga0059261_3155	0.36	-0.3
3,294,866	-		Ga0059261_3155	0.36	+0.2
3,294,866	-		Ga0059261_3155	0.36	-0.1
3,294,866	-		Ga0059261_3155	0.36	-0.6
3,294,866	-		Ga0059261_3155	0.36	-1.6
3,294,946	+		Ga0059261_3155	0.44	+0.4
3,294,946	+		Ga0059261_3155	0.44	+0.7
3,294,946	+		Ga0059261_3155	0.44	+0.7
3,294,946	+				+2.3
3,294,947	-		Ga0059261_3155	0.44	-0.4
3,294,947	-		Ga0059261_3155	0.44	-0.0
3,294,947	-		Ga0059261_3155	0.44	+1.2
3,294,982	+		Ga0059261_3155	0.47	-1.6
3,294,982	+		Ga0059261_3155	0.47	+0.4
3,294,982	+		Ga0059261_3155	0.47	+0.3
3,294,982	+		Ga0059261_3155	0.47	+0.2
3,294,982	+		Ga0059261_3155	0.47	+0.4
3,294,982	+		Ga0059261_3155	0.47	-0.3
3,294,982	+		Ga0059261_3155	0.47	-0.2
3,294,982	+		Ga0059261_3155	0.47	-0.4
3,294,982	+		Ga0059261_3155	0.47	-2.0
3,294,983	-		Ga0059261_3155	0.47	+0.5
3,294,983	-		Ga0059261_3155	0.47	+0.1
3,294,983	-		Ga0059261_3155	0.47	+0.8
3,294,983	-		Ga0059261_3155	0.47	-1.5
3,294,983	-		Ga0059261_3155	0.47	-1.6
3,294,983	-		Ga0059261_3155	0.47	+0.1
3,294,983	-		Ga0059261_3155	0.47	+2.4
3,294,983	-		Ga0059261_3155	0.47	+0.0
3,294,983	-				+1.0
3,295,009	+		Ga0059261_3155	0.50	-0.1
3,295,105	+		Ga0059261_3155	0.60	+0.2
3,295,106	-		Ga0059261_3155	0.60	-0.6
3,295,127	+		Ga0059261_3155	0.62	+0.2
3,295,289	-		Ga0059261_3155	0.78	+0.7
3,295,289	-		Ga0059261_3155	0.78	+0.8
3,295,294	+		Ga0059261_3155	0.78	-0.0
3,295,294	+		Ga0059261_3155	0.78	-0.3
3,295,294	+		Ga0059261_3155	0.78	-0.6
3,295,294	+		Ga0059261_3155	0.78	+0.9
3,295,294	+		Ga0059261_3155	0.78	+0.3
3,295,294	+		Ga0059261_3155	0.78	-0.3
3,295,294	+		Ga0059261_3155	0.78	-1.2
3,295,294	+		Ga0059261_3155	0.78	+0.3
3,295,294	+		Ga0059261_3155	0.78	-0.2
3,295,295	-		Ga0059261_3155	0.79	-0.0
3,295,295	-		Ga0059261_3155	0.79	-0.1
3,295,295	-		Ga0059261_3155	0.79	-3.1
3,295,295	-		Ga0059261_3155	0.79	+0.2
3,295,295	-		Ga0059261_3155	0.79	-0.1
3,295,295	-		Ga0059261_3155	0.79	+0.3
3,295,295	-				+0.0