Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2625

Experiment: Cholin acetate 40 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 40 mM
2,716,678	+				+0.6
2,716,886	+		Ga0059261_2624	0.28	-0.3
2,716,886	+		Ga0059261_2624	0.28	+0.6
2,716,886	+		Ga0059261_2624	0.28	+0.6
2,716,886	+		Ga0059261_2624	0.28	+1.4
2,716,886	+		Ga0059261_2624	0.28	+0.4
2,716,887	-		Ga0059261_2624	0.28	+0.3
2,716,887	-		Ga0059261_2624	0.28	-0.6
2,716,887	-		Ga0059261_2624	0.28	+0.9
2,716,887	-		Ga0059261_2624	0.28	+0.1
2,717,075	+		Ga0059261_2624	0.48	+0.1
2,717,075	+		Ga0059261_2624	0.48	+0.7
2,717,077	+		Ga0059261_2624	0.48	-0.4
2,717,077	+		Ga0059261_2624	0.48	-1.0
2,717,077	+		Ga0059261_2624	0.48	-0.7
2,717,077	+		Ga0059261_2624	0.48	-0.4
2,717,077	+		Ga0059261_2624	0.48	+0.3
2,717,078	-		Ga0059261_2624	0.48	-0.8
2,717,078	-		Ga0059261_2624	0.48	-0.7
2,717,078	-		Ga0059261_2624	0.48	+1.2
2,717,078	-		Ga0059261_2624	0.48	-0.6
2,717,078	-		Ga0059261_2624	0.48	-0.5
2,717,078	-		Ga0059261_2624	0.48	-0.6
2,717,092	+		Ga0059261_2624	0.50	-0.3
2,717,093	-		Ga0059261_2624	0.50	-0.6
2,717,093	-		Ga0059261_2624	0.50	-0.1
2,717,093	-		Ga0059261_2624	0.50	-0.6
2,717,093	-		Ga0059261_2624	0.50	-0.4
2,717,221	+		Ga0059261_2624	0.63	-0.3
2,717,221	+		Ga0059261_2624	0.63	+0.7
2,717,222	-		Ga0059261_2624	0.63	+0.7
2,717,222	-		Ga0059261_2624	0.63	+0.6
2,717,269	+		Ga0059261_2624	0.68	-0.1
2,717,269	+		Ga0059261_2624	0.68	-1.1
2,717,269	+		Ga0059261_2624	0.68	-0.3
2,717,269	+		Ga0059261_2624	0.68	-0.1
2,717,270	-		Ga0059261_2624	0.68	+0.5
2,717,270	-		Ga0059261_2624	0.68	-0.1
2,717,270	-		Ga0059261_2624	0.68	+0.5
2,717,270	-		Ga0059261_2624	0.68	-2.2
2,717,270	-		Ga0059261_2624	0.68	+0.2
2,717,270	-		Ga0059261_2624	0.68	-0.1
2,717,270	-		Ga0059261_2624	0.68	+0.3
2,717,381	+		Ga0059261_2624	0.80	+0.6
2,717,381	+		Ga0059261_2624	0.80	+1.6
2,717,381	+		Ga0059261_2624	0.80	-1.2
2,717,381	+		Ga0059261_2624	0.80	+0.3
2,717,381	+		Ga0059261_2624	0.80	-0.1
2,717,381	+		Ga0059261_2624	0.80	+0.2
2,717,382	-		Ga0059261_2624	0.80	+0.8
2,717,382	-				+0.2
2,717,382	-		Ga0059261_2624	0.80	-0.6
2,717,382	-		Ga0059261_2624	0.80	+0.1
2,717,382	-		Ga0059261_2624	0.80	+0.9
2,717,382	-		Ga0059261_2624	0.80	-0.4
2,717,382	-		Ga0059261_2624	0.80	-0.2
2,717,524	+				-1.2
2,717,524	+				-0.3
2,717,524	+				-0.8
2,717,524	+				+0.2
2,717,524	+				-0.4
2,717,524	+				+0.8
2,717,525	-				-0.4
2,717,525	-				+0.4
2,717,525	-				-0.6
2,717,613	+				-1.0
2,717,613	+				+1.2
2,717,613	+				-0.3
2,717,613	+				-0.1
2,717,613	+				+0.1
2,717,613	+				+0.8
2,717,614	-				-0.6
2,717,614	-				-1.3
2,717,614	-				-0.0
2,717,614	-				-0.6
2,717,614	-				-0.7
2,717,614	-				-0.9
2,717,683	+		Ga0059261_2625	0.13	-1.3
2,717,684	-		Ga0059261_2625	0.13	-0.4
2,717,684	-		Ga0059261_2625	0.13	+0.1
2,717,684	-		Ga0059261_2625	0.13	+0.6
2,717,684	-		Ga0059261_2625	0.13	+0.0
2,717,684	-		Ga0059261_2625	0.13	+0.4
2,717,684	-		Ga0059261_2625	0.13	+0.0
2,717,684	-		Ga0059261_2625	0.13	+0.7
2,717,684	-		Ga0059261_2625	0.13	-1.3
2,717,684	-		Ga0059261_2625	0.13	-0.5
2,717,836	+		Ga0059261_2625	0.30	-0.0
2,717,836	+		Ga0059261_2625	0.30	-0.1
2,717,836	+		Ga0059261_2625	0.30	-0.4
2,717,983	-		Ga0059261_2625	0.47	+0.2
2,718,056	-		Ga0059261_2625	0.55	+0.9
2,718,066	-		Ga0059261_2625	0.56	+0.2
2,718,066	-		Ga0059261_2625	0.56	-0.4
2,718,066	-		Ga0059261_2625	0.56	-0.5
2,718,078	+		Ga0059261_2625	0.58	-0.1
2,718,078	+		Ga0059261_2625	0.58	-0.7
2,718,078	+		Ga0059261_2625	0.58	-0.6
2,718,078	+		Ga0059261_2625	0.58	+2.2
2,718,078	+		Ga0059261_2625	0.58	+0.5
2,718,078	+		Ga0059261_2625	0.58	+0.0
2,718,078	+		Ga0059261_2625	0.58	+0.6
2,718,079	-		Ga0059261_2625	0.58	-0.3
2,718,079	-		Ga0059261_2625	0.58	+1.0
2,718,079	-		Ga0059261_2625	0.58	+0.1
2,718,079	-		Ga0059261_2625	0.58	-0.1
2,718,079	-		Ga0059261_2625	0.58	+0.4
2,718,079	-		Ga0059261_2625	0.58	-1.0
2,718,079	-		Ga0059261_2625	0.58	+0.1
2,718,079	-		Ga0059261_2625	0.58	+0.3
2,718,123	+				+0.2
2,718,123	+		Ga0059261_2625	0.63	+0.1
2,718,123	+		Ga0059261_2625	0.63	-0.0
2,718,123	+		Ga0059261_2625	0.63	-0.3
2,718,123	+		Ga0059261_2625	0.63	+0.4
2,718,174	+		Ga0059261_2625	0.69	-0.1
2,718,174	+		Ga0059261_2625	0.69	+0.2
2,718,174	+		Ga0059261_2625	0.69	+0.9
2,718,174	+		Ga0059261_2625	0.69	-0.2
2,718,174	+		Ga0059261_2625	0.69	-0.3
2,718,175	-		Ga0059261_2625	0.69	-0.2
2,718,175	-		Ga0059261_2625	0.69	-0.6
2,718,175	-		Ga0059261_2625	0.69	+0.2
2,718,175	-		Ga0059261_2625	0.69	+0.9
2,718,175	-		Ga0059261_2625	0.69	+0.4
2,718,382	-				-0.1
2,718,382	-				+1.8
2,718,382	-				+0.3
2,718,382	-				-0.4
2,718,382	-				-0.2
2,718,405	+				-0.4
2,718,405	+				-1.6
2,718,405	+				-1.1
2,718,405	+				-0.6
2,718,405	+				+0.3
2,718,405	+				-0.8
2,718,405	+				+1.3
2,718,405	+				+0.6
2,718,405	+				+0.7
2,718,405	+				-0.4
2,718,405	+				-0.7
2,718,405	+				-0.1
2,718,405	+				-0.2
2,718,406	-				+1.0
2,718,406	-				-1.5
2,718,406	-				+1.0
2,718,406	-				+0.1
2,718,406	-				+0.2
2,718,406	-				+0.1
2,718,406	-				-0.2
2,718,406	-				+0.6
2,718,406	-				-2.1
2,718,406	-				-0.0
2,718,406	-				-0.5
2,718,406	-				+1.2
2,718,406	-				-0.5
2,718,406	-				+0.2
2,718,406	-				-1.3
2,718,406	-				-1.1
2,718,406	-				-0.4
2,718,415	+				+1.2
2,718,415	+				+0.3
2,718,416	-				-1.4
2,718,416	-				+0.6
2,718,446	-				+1.0
2,718,446	-				-0.3
2,718,500	+				-0.8
2,718,637	+				-0.0
2,718,637	+				+0.0
2,718,638	-				-0.9
2,718,638	-				-1.6
2,718,638	-				+0.3
2,718,881	+		Ga0059261_2626	0.21	-0.6
2,718,881	+		Ga0059261_2626	0.21	+0.5
2,718,881	+		Ga0059261_2626	0.21	-0.2
2,718,882	-		Ga0059261_2626	0.21	-0.8
2,718,882	-		Ga0059261_2626	0.21	-0.4
2,718,882	-		Ga0059261_2626	0.21	-0.1
2,718,882	-				+0.5
2,719,154	+		Ga0059261_2626	0.56	-0.8
2,719,154	+		Ga0059261_2626	0.56	+0.2
2,719,154	+		Ga0059261_2626	0.56	+0.8
2,719,154	+				-0.2
2,719,154	+				-1.4
2,719,154	+		Ga0059261_2626	0.56	+0.4
2,719,154	+		Ga0059261_2626	0.56	+0.4
2,719,155	-		Ga0059261_2626	0.56	+1.1
2,719,155	-		Ga0059261_2626	0.56	+0.4
2,719,155	-		Ga0059261_2626	0.56	-0.6
2,719,155	-		Ga0059261_2626	0.56	+0.3
2,719,155	-		Ga0059261_2626	0.56	-0.3
2,719,155	-		Ga0059261_2626	0.56	+0.4
2,719,155	-		Ga0059261_2626	0.56	+0.3
2,719,155	-		Ga0059261_2626	0.56	-0.4
2,719,155	-		Ga0059261_2626	0.56	+0.1
2,719,155	-		Ga0059261_2626	0.56	+0.4
2,719,155	-		Ga0059261_2626	0.56	-1.1
2,719,215	+		Ga0059261_2626	0.64	+0.4
2,719,216	-		Ga0059261_2626	0.64	-1.6
2,719,216	-		Ga0059261_2626	0.64	-0.5
2,719,287	+		Ga0059261_2626	0.73	-0.8
2,719,287	+		Ga0059261_2626	0.73	-0.3
2,719,288	-		Ga0059261_2626	0.73	-0.4
2,719,288	-		Ga0059261_2626	0.73	-0.2