Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1629

Experiment: Cholin acetate 40 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 40 mM
1,707,591	+		Ga0059261_1628	0.69	+0.2
1,707,592	-		Ga0059261_1628	0.69	-0.8
1,707,592	-		Ga0059261_1628	0.69	+0.6
1,707,592	-		Ga0059261_1628	0.69	+0.1
1,707,673	+		Ga0059261_1628	0.72	+0.3
1,707,674	-		Ga0059261_1628	0.72	-0.2
1,707,780	+		Ga0059261_1628	0.76	+1.1
1,707,780	+		Ga0059261_1628	0.76	+0.5
1,707,780	+		Ga0059261_1628	0.76	-0.1
1,707,780	+				+3.1
1,707,780	+		Ga0059261_1628	0.76	+0.1
1,707,780	+		Ga0059261_1628	0.76	-0.3
1,707,780	+		Ga0059261_1628	0.76	-0.6
1,707,780	+		Ga0059261_1628	0.76	-0.3
1,707,780	+		Ga0059261_1628	0.76	+0.1
1,707,780	+		Ga0059261_1628	0.76	-2.5
1,707,780	+		Ga0059261_1628	0.76	+0.4
1,707,780	+		Ga0059261_1628	0.76	+0.5
1,707,780	+		Ga0059261_1628	0.76	+0.1
1,707,781	-		Ga0059261_1628	0.76	-0.5
1,707,781	-		Ga0059261_1628	0.76	-0.7
1,707,781	-		Ga0059261_1628	0.76	+1.4
1,707,781	-				+0.1
1,707,781	-		Ga0059261_1628	0.76	+0.1
1,707,781	-		Ga0059261_1628	0.76	+0.3
1,707,783	+		Ga0059261_1628	0.76	+0.3
1,707,784	-		Ga0059261_1628	0.76	+0.2
1,707,784	-		Ga0059261_1628	0.76	+0.1
1,707,784	-		Ga0059261_1628	0.76	-0.6
1,707,784	-		Ga0059261_1628	0.76	-0.1
1,707,816	+		Ga0059261_1628	0.77	+0.1
1,707,868	-		Ga0059261_1628	0.79	+0.2
1,707,868	-		Ga0059261_1628	0.79	+0.2
1,707,898	+		Ga0059261_1628	0.80	-0.2
1,707,899	-		Ga0059261_1628	0.80	+0.6
1,707,899	-		Ga0059261_1628	0.80	-0.0
1,707,899	-		Ga0059261_1628	0.80	+0.4
1,707,906	+		Ga0059261_1628	0.80	+0.7
1,707,907	-		Ga0059261_1628	0.80	-0.9
1,707,907	-		Ga0059261_1628	0.80	+0.8
1,707,907	-		Ga0059261_1628	0.80	-0.3
1,707,907	-		Ga0059261_1628	0.80	-0.3
1,707,969	+		Ga0059261_1628	0.82	-0.1
1,707,969	+		Ga0059261_1628	0.82	+0.0
1,707,969	+		Ga0059261_1628	0.82	-0.3
1,707,970	-		Ga0059261_1628	0.82	+0.5
1,707,970	-		Ga0059261_1628	0.82	+0.4
1,707,970	-		Ga0059261_1628	0.82	+1.8
1,707,970	-		Ga0059261_1628	0.82	-0.3
1,707,970	-		Ga0059261_1628	0.82	-0.1
1,707,974	+		Ga0059261_1628	0.82	+0.3
1,707,974	+		Ga0059261_1628	0.82	+0.1
1,707,974	+		Ga0059261_1628	0.82	-0.1
1,707,974	+		Ga0059261_1628	0.82	+0.1
1,707,974	+		Ga0059261_1628	0.82	-0.0
1,707,975	-		Ga0059261_1628	0.82	+1.3
1,707,975	-		Ga0059261_1628	0.82	+0.4
1,707,975	-		Ga0059261_1628	0.82	-0.3
1,708,047	+		Ga0059261_1628	0.85	-0.3
1,708,047	+		Ga0059261_1628	0.85	+1.2
1,708,047	+		Ga0059261_1628	0.85	+1.5
1,708,047	+		Ga0059261_1628	0.85	-0.2
1,708,047	+		Ga0059261_1628	0.85	+0.5
1,708,048	-		Ga0059261_1628	0.85	+1.4
1,708,048	-		Ga0059261_1628	0.85	+1.1
1,708,612	+				-0.1
1,708,717	-				-0.6
1,708,717	-				+0.1
1,708,728	-				-0.1
1,708,875	+		Ga0059261_1629	0.16	+0.1
1,708,875	+		Ga0059261_1629	0.16	-0.7
1,708,896	+		Ga0059261_1629	0.17	+0.7
1,708,896	+		Ga0059261_1629	0.17	+0.2
1,708,896	+		Ga0059261_1629	0.17	+0.0
1,708,896	+		Ga0059261_1629	0.17	+0.1
1,708,897	-		Ga0059261_1629	0.17	+0.8
1,708,897	-		Ga0059261_1629	0.17	-0.1
1,708,897	-		Ga0059261_1629	0.17	+0.1
1,708,897	-		Ga0059261_1629	0.17	-0.3
1,708,897	-		Ga0059261_1629	0.17	+0.2
1,708,897	-		Ga0059261_1629	0.17	-0.9
1,708,897	-		Ga0059261_1629	0.17	+0.7
1,708,897	-		Ga0059261_1629	0.17	-0.0
1,708,898	+		Ga0059261_1629	0.17	+0.7
1,708,898	+		Ga0059261_1629	0.17	+0.3
1,708,898	+		Ga0059261_1629	0.17	+1.0
1,708,898	+		Ga0059261_1629	0.17	-1.4
1,708,898	+		Ga0059261_1629	0.17	-0.2
1,708,898	+		Ga0059261_1629	0.17	-0.1
1,708,898	+		Ga0059261_1629	0.17	+0.6
1,708,898	+		Ga0059261_1629	0.17	+0.1
1,708,898	+		Ga0059261_1629	0.17	-0.4
1,708,898	+		Ga0059261_1629	0.17	-1.6
1,708,898	+		Ga0059261_1629	0.17	+0.5
1,708,898	+		Ga0059261_1629	0.17	-0.5
1,708,898	+		Ga0059261_1629	0.17	-0.3
1,708,899	-		Ga0059261_1629	0.17	-0.0
1,708,899	-		Ga0059261_1629	0.17	-0.5
1,708,899	-		Ga0059261_1629	0.17	+0.5
1,708,899	-		Ga0059261_1629	0.17	-0.4
1,708,899	-		Ga0059261_1629	0.17	+1.1
1,708,899	-		Ga0059261_1629	0.17	+1.3
1,708,899	-		Ga0059261_1629	0.17	+0.5
1,708,899	-		Ga0059261_1629	0.17	+0.2
1,708,899	-		Ga0059261_1629	0.17	+0.7
1,708,899	-		Ga0059261_1629	0.17	+0.1
1,708,899	-		Ga0059261_1629	0.17	+1.1
1,708,899	-		Ga0059261_1629	0.17	-0.1
1,708,899	-		Ga0059261_1629	0.17	-0.0
1,708,899	-		Ga0059261_1629	0.17	+0.1
1,708,899	-		Ga0059261_1629	0.17	+0.1
1,708,899	-		Ga0059261_1629	0.17	-0.3
1,708,899	-		Ga0059261_1629	0.17	+1.1
1,709,085	-		Ga0059261_1629	0.27	+1.1
1,709,123	+		Ga0059261_1629	0.29	+0.4
1,709,138	+		Ga0059261_1629	0.30	+0.1
1,709,138	+		Ga0059261_1629	0.30	+0.9
1,709,139	-		Ga0059261_1629	0.30	+0.1
1,709,139	-		Ga0059261_1629	0.30	-0.2
1,709,231	+		Ga0059261_1629	0.35	-0.5
1,709,232	-		Ga0059261_1629	0.35	+0.1
1,709,291	+		Ga0059261_1629	0.38	+0.6
1,709,292	-		Ga0059261_1629	0.38	+0.2
1,709,318	+		Ga0059261_1629	0.40	-0.2
1,709,318	+		Ga0059261_1629	0.40	+0.2
1,709,319	-		Ga0059261_1629	0.40	-0.1
1,709,348	+		Ga0059261_1629	0.41	-0.8
1,709,348	+		Ga0059261_1629	0.41	-0.2
1,709,348	+		Ga0059261_1629	0.41	-1.1
1,709,348	+		Ga0059261_1629	0.41	-0.4
1,709,349	-		Ga0059261_1629	0.41	+0.2
1,709,349	-		Ga0059261_1629	0.41	+1.3
1,709,349	-		Ga0059261_1629	0.41	-0.2
1,709,349	-		Ga0059261_1629	0.41	-0.3
1,709,352	+		Ga0059261_1629	0.41	+0.1
1,709,352	+		Ga0059261_1629	0.41	+0.5
1,709,352	+		Ga0059261_1629	0.41	-0.4
1,709,352	+		Ga0059261_1629	0.41	+0.8
1,709,352	+		Ga0059261_1629	0.41	+1.1
1,709,352	+		Ga0059261_1629	0.41	+0.6
1,709,352	+		Ga0059261_1629	0.41	-1.0
1,709,352	+		Ga0059261_1629	0.41	+0.8
1,709,352	+		Ga0059261_1629	0.41	-0.3
1,709,352	+		Ga0059261_1629	0.41	-0.2
1,709,352	+		Ga0059261_1629	0.41	-1.1
1,709,352	+		Ga0059261_1629	0.41	+0.7
1,709,352	+		Ga0059261_1629	0.41	+0.3
1,709,352	+		Ga0059261_1629	0.41	-0.8
1,709,352	+		Ga0059261_1629	0.41	-0.3
1,709,353	-		Ga0059261_1629	0.42	+0.1
1,709,353	-		Ga0059261_1629	0.42	-0.4
1,709,353	-		Ga0059261_1629	0.42	-0.2
1,709,353	-		Ga0059261_1629	0.42	-0.3
1,709,353	-		Ga0059261_1629	0.42	-0.7
1,709,353	-		Ga0059261_1629	0.42	+0.4
1,709,353	-		Ga0059261_1629	0.42	+1.1
1,709,353	-		Ga0059261_1629	0.42	+0.3
1,709,353	-		Ga0059261_1629	0.42	+0.5
1,709,353	-		Ga0059261_1629	0.42	-0.1
1,709,353	-		Ga0059261_1629	0.42	-0.1
1,709,353	-		Ga0059261_1629	0.42	-0.4
1,709,353	-		Ga0059261_1629	0.42	-1.0
1,709,353	-		Ga0059261_1629	0.42	+0.5
1,709,353	-		Ga0059261_1629	0.42	-0.1
1,709,353	-		Ga0059261_1629	0.42	-0.1
1,709,353	-		Ga0059261_1629	0.42	-0.3
1,709,405	+		Ga0059261_1629	0.44	+0.2
1,709,405	+		Ga0059261_1629	0.44	+2.2
1,709,405	+		Ga0059261_1629	0.44	-0.3
1,709,477	+		Ga0059261_1629	0.48	+0.4
1,709,477	+		Ga0059261_1629	0.48	+0.5
1,709,477	+				+1.1
1,709,478	-		Ga0059261_1629	0.48	+0.7
1,709,478	-		Ga0059261_1629	0.48	+0.1
1,709,478	-		Ga0059261_1629	0.48	+0.4
1,709,478	-		Ga0059261_1629	0.48	+0.2
1,709,478	-		Ga0059261_1629	0.48	-0.7
1,709,478	-		Ga0059261_1629	0.48	-0.9
1,709,507	+		Ga0059261_1629	0.50	-0.7
1,709,507	+		Ga0059261_1629	0.50	-0.8
1,709,507	+		Ga0059261_1629	0.50	+1.6
1,709,507	+		Ga0059261_1629	0.50	+0.3
1,709,507	+		Ga0059261_1629	0.50	-0.5
1,709,507	+		Ga0059261_1629	0.50	+0.4
1,709,508	-		Ga0059261_1629	0.50	+0.3
1,709,508	-		Ga0059261_1629	0.50	-0.1
1,709,508	-		Ga0059261_1629	0.50	+0.2
1,709,508	-		Ga0059261_1629	0.50	+0.1
1,709,508	-		Ga0059261_1629	0.50	+0.7
1,709,588	+		Ga0059261_1629	0.54	+0.1
1,709,588	+		Ga0059261_1629	0.54	-0.1
1,709,588	+		Ga0059261_1629	0.54	-0.9
1,709,588	+		Ga0059261_1629	0.54	+0.5
1,709,588	+		Ga0059261_1629	0.54	-0.3
1,709,588	+		Ga0059261_1629	0.54	+0.3
1,709,589	-		Ga0059261_1629	0.54	+0.3
1,709,609	+		Ga0059261_1629	0.55	+0.3
1,709,610	-		Ga0059261_1629	0.55	+0.5
1,709,750	+		Ga0059261_1629	0.63	-0.4
1,709,807	+		Ga0059261_1629	0.66	-0.1
1,709,808	-		Ga0059261_1629	0.66	-1.0
1,709,808	-		Ga0059261_1629	0.66	-0.3
1,709,816	+		Ga0059261_1629	0.66	+0.8
1,709,817	-		Ga0059261_1629	0.66	-0.1
1,709,912	+		Ga0059261_1629	0.72	-0.8
1,709,912	+		Ga0059261_1629	0.72	-0.1
1,709,912	+		Ga0059261_1629	0.72	+0.6
1,709,913	-		Ga0059261_1629	0.72	-0.1
1,709,913	-		Ga0059261_1629	0.72	+0.2
1,709,913	-		Ga0059261_1629	0.72	-0.5
1,709,915	+		Ga0059261_1629	0.72	-0.7
1,709,915	+		Ga0059261_1629	0.72	+0.0
1,709,915	+		Ga0059261_1629	0.72	-0.4
1,709,915	+		Ga0059261_1629	0.72	-0.2
1,709,915	+		Ga0059261_1629	0.72	+0.4
1,709,915	+		Ga0059261_1629	0.72	-0.5
1,709,915	+		Ga0059261_1629	0.72	-0.8
1,709,915	+		Ga0059261_1629	0.72	+0.6
1,709,915	+		Ga0059261_1629	0.72	-0.3
1,709,915	+		Ga0059261_1629	0.72	+0.2
1,709,915	+		Ga0059261_1629	0.72	+0.1
1,709,916	-		Ga0059261_1629	0.72	+1.1
1,709,916	-		Ga0059261_1629	0.72	-0.0
1,709,916	-		Ga0059261_1629	0.72	+0.4
1,709,916	-		Ga0059261_1629	0.72	+0.2
1,709,916	-		Ga0059261_1629	0.72	+0.3
1,709,916	-		Ga0059261_1629	0.72	-0.8
1,710,059	+		Ga0059261_1629	0.79	+0.5
1,710,059	+		Ga0059261_1629	0.79	-0.5
1,710,060	-		Ga0059261_1629	0.79	+0.3
1,710,060	-		Ga0059261_1629	0.79	+0.7
1,710,060	-		Ga0059261_1629	0.79	+0.1
1,710,062	+		Ga0059261_1629	0.80	+0.1
1,710,062	+		Ga0059261_1629	0.80	-0.3
1,710,062	+		Ga0059261_1629	0.80	+0.6
1,710,062	+		Ga0059261_1629	0.80	+0.2
1,710,062	+		Ga0059261_1629	0.80	+0.1
1,710,062	+		Ga0059261_1629	0.80	-0.3
1,710,063	-		Ga0059261_1629	0.80	+0.1
1,710,065	+		Ga0059261_1629	0.80	-0.2
1,710,065	+		Ga0059261_1629	0.80	-0.5
1,710,065	+		Ga0059261_1629	0.80	-0.7
1,710,065	+		Ga0059261_1629	0.80	+0.1
1,710,065	+		Ga0059261_1629	0.80	-0.1
1,710,065	+		Ga0059261_1629	0.80	+0.6
1,710,065	+		Ga0059261_1629	0.80	-0.7
1,710,065	+		Ga0059261_1629	0.80	-0.2
1,710,065	+		Ga0059261_1629	0.80	+0.2
1,710,065	+		Ga0059261_1629	0.80	+0.6
1,710,065	+		Ga0059261_1629	0.80	-0.4
1,710,065	+		Ga0059261_1629	0.80	-0.3
1,710,065	+		Ga0059261_1629	0.80	+0.2
1,710,065	+				+0.7
1,710,065	+		Ga0059261_1629	0.80	+0.3
1,710,065	+		Ga0059261_1629	0.80	+0.1
1,710,065	+		Ga0059261_1629	0.80	-0.4
1,710,065	+		Ga0059261_1629	0.80	-1.8
1,710,065	+		Ga0059261_1629	0.80	-1.3
1,710,065	+		Ga0059261_1629	0.80	-0.3
1,710,065	+		Ga0059261_1629	0.80	+0.1
1,710,065	+		Ga0059261_1629	0.80	-0.7
1,710,065	+		Ga0059261_1629	0.80	+0.3
1,710,065	+		Ga0059261_1629	0.80	-0.4
1,710,065	+		Ga0059261_1629	0.80	+0.1
1,710,066	-		Ga0059261_1629	0.80	-0.0
1,710,066	-		Ga0059261_1629	0.80	-0.2
1,710,066	-		Ga0059261_1629	0.80	+0.5
1,710,066	-		Ga0059261_1629	0.80	+0.3
1,710,066	-		Ga0059261_1629	0.80	-0.0
1,710,066	-		Ga0059261_1629	0.80	+0.1
1,710,066	-		Ga0059261_1629	0.80	-0.2
1,710,066	-		Ga0059261_1629	0.80	-0.2
1,710,066	-		Ga0059261_1629	0.80	-0.2
1,710,066	-		Ga0059261_1629	0.80	+0.5
1,710,066	-		Ga0059261_1629	0.80	+0.1
1,710,066	-		Ga0059261_1629	0.80	+1.5
1,710,066	-		Ga0059261_1629	0.80	+1.0
1,710,066	-		Ga0059261_1629	0.80	-0.4
1,710,066	-		Ga0059261_1629	0.80	+1.7
1,710,066	-		Ga0059261_1629	0.80	+0.3
1,710,066	-		Ga0059261_1629	0.80	-0.2
1,710,066	-		Ga0059261_1629	0.80	-0.1
1,710,066	-		Ga0059261_1629	0.80	-0.5
1,710,066	-		Ga0059261_1629	0.80	-0.3
1,710,066	-		Ga0059261_1629	0.80	-1.7
1,710,176	+		Ga0059261_1629	0.86	-0.2
1,710,350	+				+0.7
1,710,351	-				+0.2
1,710,427	+				-0.9
1,710,427	+				+0.1
1,710,427	+				-1.0
1,710,428	-				+0.8
1,710,428	-				-0.3
1,710,428	-				+0.6
1,710,428	-				-0.0
1,710,431	+				-0.3
1,710,431	+				-0.6
1,710,431	+				+0.3
1,710,432	-				-0.6
1,710,470	-				-0.6
1,710,470	-				+0.7
1,710,470	-				+1.1
1,710,470	-				+0.3
1,710,470	-				-0.6
1,710,508	+				+0.5
1,710,508	+				-0.4
1,710,508	+				+0.5
1,710,509	-				+0.1
1,710,634	+		Ga0059261_1630	0.17	+0.4
1,710,635	-		Ga0059261_1630	0.17	+0.2
1,710,635	-		Ga0059261_1630	0.17	+0.5
1,710,682	+		Ga0059261_1630	0.21	-0.9
1,710,682	+		Ga0059261_1630	0.21	-0.1
1,710,682	+		Ga0059261_1630	0.21	-0.7
1,710,682	+		Ga0059261_1630	0.21	+0.0
1,710,682	+		Ga0059261_1630	0.21	+0.3
1,710,682	+		Ga0059261_1630	0.21	+0.1
1,710,682	+		Ga0059261_1630	0.21	-0.2
1,710,683	-		Ga0059261_1630	0.21	+0.0
1,710,683	-		Ga0059261_1630	0.21	+0.5
1,710,683	-		Ga0059261_1630	0.21	+0.2
1,710,719	+		Ga0059261_1630	0.24	-0.3
1,710,754	+		Ga0059261_1630	0.27	-1.0
1,710,754	+		Ga0059261_1630	0.27	+0.7
1,710,755	-		Ga0059261_1630	0.27	+0.7
1,710,755	-		Ga0059261_1630	0.27	+1.3
1,710,814	+		Ga0059261_1630	0.33	-0.5
1,710,814	+		Ga0059261_1630	0.33	+0.1
1,710,814	+		Ga0059261_1630	0.33	-0.6
1,710,814	+		Ga0059261_1630	0.33	+0.2
1,710,814	+				+0.1
1,710,815	-		Ga0059261_1630	0.33	-0.1
1,710,815	-		Ga0059261_1630	0.33	-0.4
1,710,815	-		Ga0059261_1630	0.33	+1.1
1,710,815	-		Ga0059261_1630	0.33	+0.2
1,710,817	+				-0.9
1,710,817	+		Ga0059261_1630	0.33	+0.5
1,710,817	+		Ga0059261_1630	0.33	-0.3
1,710,817	+		Ga0059261_1630	0.33	-0.9
1,710,817	+		Ga0059261_1630	0.33	-0.0
1,710,817	+		Ga0059261_1630	0.33	+0.1
1,710,817	+		Ga0059261_1630	0.33	+0.2
1,710,817	+		Ga0059261_1630	0.33	+0.7
1,710,817	+		Ga0059261_1630	0.33	-0.1
1,710,817	+		Ga0059261_1630	0.33	-0.4
1,710,818	-		Ga0059261_1630	0.33	+0.6
1,710,818	-		Ga0059261_1630	0.33	+0.2
1,710,818	-		Ga0059261_1630	0.33	+0.1
1,710,818	-		Ga0059261_1630	0.33	+0.1
1,710,955	+		Ga0059261_1630	0.45	+0.6
1,710,955	+		Ga0059261_1630	0.45	-0.2
1,710,955	+		Ga0059261_1630	0.45	-0.3
1,710,955	+		Ga0059261_1630	0.45	-0.2
1,710,956	-		Ga0059261_1630	0.45	+0.5
1,710,956	-		Ga0059261_1630	0.45	+0.3
1,710,976	+		Ga0059261_1630	0.47	-0.0
1,710,976	+		Ga0059261_1630	0.47	-0.6
1,710,976	+		Ga0059261_1630	0.47	-0.9
1,710,977	-		Ga0059261_1630	0.47	-0.5
1,710,977	-		Ga0059261_1630	0.47	+0.9
1,710,977	-		Ga0059261_1630	0.47	-0.5
1,710,982	+		Ga0059261_1630	0.47	+0.3
1,710,982	+		Ga0059261_1630	0.47	+0.3
1,710,982	+		Ga0059261_1630	0.47	+0.1
1,710,982	+		Ga0059261_1630	0.47	-1.5
1,710,983	-		Ga0059261_1630	0.47	+0.2
1,711,024	+		Ga0059261_1630	0.51	-0.0
1,711,192	+		Ga0059261_1630	0.66	-0.1
1,711,342	+		Ga0059261_1630	0.79	+0.2
1,711,342	+		Ga0059261_1630	0.79	-0.2