Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS36565

Experiment: Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.064 mg/ml
115,000	+		BPHYT_RS36555	0.15	+0.4
115,000	+		BPHYT_RS36555	0.15	-2.9
115,000	+		BPHYT_RS36555	0.15	+1.1
115,000	+		BPHYT_RS36555	0.15	+0.4
115,000	+		BPHYT_RS36555	0.15	+0.5
115,001	-				+0.9
115,004	-		BPHYT_RS36555	0.16	-0.3
115,037	+		BPHYT_RS36555	0.21	+0.4
115,037	+		BPHYT_RS36555	0.21	+0.9
115,037	+		BPHYT_RS36555	0.21	+1.1
115,109	+		BPHYT_RS36555	0.31	+0.7
115,109	+		BPHYT_RS36555	0.31	+0.9
115,110	-		BPHYT_RS36555	0.31	-0.4
115,184	+		BPHYT_RS36555	0.42	+0.4
115,189	+		BPHYT_RS36555	0.43	+0.7
115,189	+		BPHYT_RS36555	0.43	-0.1
115,190	-		BPHYT_RS36555	0.43	-0.5
115,270	+		BPHYT_RS36555	0.55	+0.8
115,632	+				+1.0
115,632	+				+1.2
115,632	+				+0.7
115,632	+				+0.9
115,632	+				+0.4
115,632	+				+0.9
115,633	-				-1.6
115,633	-				-0.3
115,633	-				+1.2
115,674	+				+1.6
115,674	+				+0.0
115,689	+				+0.9
115,689	+				+0.5
115,690	-				+0.2
115,690	-				+0.0
115,693	+				+0.2
115,694	-				-0.2
115,694	-				+0.8
115,740	+		BPHYT_RS36560	0.12	+0.1
115,796	+		BPHYT_RS36560	0.33	-0.3
115,824	-		BPHYT_RS36560	0.43	-0.2
116,025	+				+0.5
116,026	-		BPHYT_RS36565	0.10	-0.4
116,186	+		BPHYT_RS36565	0.42	+0.7
116,186	+		BPHYT_RS36565	0.42	+0.5
116,186	+		BPHYT_RS36565	0.42	+1.0
116,187	-		BPHYT_RS36565	0.42	-0.3
116,187	-		BPHYT_RS36565	0.42	+1.9
116,252	+		BPHYT_RS36565	0.55	+1.9
116,252	+		BPHYT_RS36565	0.55	+0.7
116,252	+		BPHYT_RS36565	0.55	+0.8
116,253	-		BPHYT_RS36565	0.55	-0.7
116,253	-		BPHYT_RS36565	0.55	+1.5
116,253	-		BPHYT_RS36565	0.55	-0.3
116,253	-		BPHYT_RS36565	0.55	-0.5
116,276	+		BPHYT_RS36565	0.60	+0.5
116,276	+		BPHYT_RS36565	0.60	+0.5
116,276	+		BPHYT_RS36565	0.60	+0.6
116,294	+		BPHYT_RS36565	0.63	+0.4
116,294	+		BPHYT_RS36565	0.63	-0.1
116,294	+		BPHYT_RS36565	0.63	+0.5
116,294	+		BPHYT_RS36565	0.63	+0.5
116,294	+		BPHYT_RS36565	0.63	+1.9
116,295	-		BPHYT_RS36565	0.64	+0.1
116,389	+		BPHYT_RS36565	0.82	+0.8
116,462	-				+2.5
116,462	-				-0.7
116,701	+				+0.2
116,810	-		BPHYT_RS36570	0.45	-0.4