Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS36005

Experiment: Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.064 mg/ml
32,125	+				+1.1
32,172	-				-0.7
32,286	+		BPHYT_RS35995	0.43	+0.0
32,321	+		BPHYT_RS35995	0.58	-0.7
32,330	+		BPHYT_RS35995	0.62	+0.1
32,330	+		BPHYT_RS35995	0.62	+0.9
32,331	-		BPHYT_RS35995	0.62	+0.2
32,331	-		BPHYT_RS35995	0.62	-0.1
32,380	+		BPHYT_RS35995	0.83	+0.2
32,487	+				-0.7
32,488	-				-0.2
32,501	-				-0.1
32,814	-		BPHYT_RS36000	0.63	-0.2
32,829	-		BPHYT_RS36000	0.69	-0.5
32,829	-		BPHYT_RS36000	0.69	+0.7
32,933	-				+0.5
32,949	+				-0.4
33,030	+				-1.1
33,033	+				-0.5
33,033	+				+0.1
33,109	+		BPHYT_RS36005	0.17	-2.0
33,110	-		BPHYT_RS36005	0.17	-0.6
33,110	-		BPHYT_RS36005	0.17	-0.8
33,239	-				+1.5
33,239	-		BPHYT_RS36005	0.57	-0.2
33,329	-		BPHYT_RS36005	0.85	-0.2
33,358	+				+0.1
33,359	-				+0.2
33,359	-				-1.8
33,560	+		BPHYT_RS36010	0.25	+0.9
33,774	+		BPHYT_RS36010	0.70	-0.5
33,775	-		BPHYT_RS36010	0.70	+2.3
33,787	+		BPHYT_RS36010	0.73	+1.5
33,787	+		BPHYT_RS36010	0.73	-0.0
33,787	+		BPHYT_RS36010	0.73	-0.3
33,788	-		BPHYT_RS36010	0.73	-1.0
33,847	+		BPHYT_RS36010	0.86	+0.2
33,902	+				+0.9
33,924	-				-0.1
33,924	-				-0.4
34,153	+				-0.3
34,154	-				-0.2
34,273	-				-1.5