Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33985

Experiment: Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.064 mg/ml
3,216,369	+		BPHYT_RS33980	0.68	-2.5
3,216,454	-		BPHYT_RS33980	0.71	-1.5
3,216,832	-		BPHYT_RS33980	0.85	-2.5
3,216,876	+		BPHYT_RS33980	0.86	-2.1
3,216,932	+		BPHYT_RS33980	0.88	-2.2
3,216,933	-		BPHYT_RS33980	0.89	-0.6
3,217,060	-				-1.3
3,217,247	+				-1.4
3,217,248	-				+0.0
3,217,256	-				+1.3
3,217,505	+		BPHYT_RS33985	0.14	-0.2
3,217,657	+		BPHYT_RS33985	0.28	+0.3
3,217,817	-		BPHYT_RS33985	0.43	-0.2
3,217,817	-		BPHYT_RS33985	0.43	-0.5
3,217,915	+		BPHYT_RS33985	0.52	+0.0
3,217,916	-		BPHYT_RS33985	0.52	-0.3
3,217,979	+		BPHYT_RS33985	0.58	+0.3
3,218,054	-		BPHYT_RS33985	0.65	-0.5
3,218,054	-		BPHYT_RS33985	0.65	+1.3
3,218,133	+		BPHYT_RS33985	0.72	-0.3
3,218,786	-		BPHYT_RS33990	0.76	-1.3
3,218,931	-				+0.8
3,218,931	-				+0.1
3,219,007	-				+0.5
3,219,007	-				-1.9
3,219,018	-				-0.3
3,219,120	+		BPHYT_RS33995	0.14	+0.0
3,219,121	-		BPHYT_RS33995	0.14	+0.1
3,219,121	-		BPHYT_RS33995	0.14	+0.6
3,219,379	+		BPHYT_RS33995	0.56	+0.7
3,219,413	-		BPHYT_RS33995	0.62	-1.4