Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33975

Experiment: Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.064 mg/ml
3,212,062	+		BPHYT_RS33965	0.71	-1.1
3,212,062	+		BPHYT_RS33965	0.71	+0.7
3,212,378	-				-0.5
3,212,475	+				-0.4
3,212,489	+				-0.0
3,212,489	+				-0.5
3,212,489	+				-0.5
3,213,009	+				+0.3
3,213,009	+				+0.8
3,213,009	+				-0.1
3,213,010	-				+0.1
3,213,013	+				+1.4
3,213,099	+				+1.8
3,213,099	+				+0.9
3,213,191	+		BPHYT_RS33975	0.11	-0.0
3,213,191	+		BPHYT_RS33975	0.11	+0.4
3,213,192	-		BPHYT_RS33975	0.11	-0.8
3,213,507	-		BPHYT_RS33975	0.32	-1.4
3,213,550	+		BPHYT_RS33975	0.35	+0.1
3,213,551	-		BPHYT_RS33975	0.35	+0.4
3,213,551	-		BPHYT_RS33975	0.35	-0.2
3,213,551	-		BPHYT_RS33975	0.35	-0.1
3,213,551	-		BPHYT_RS33975	0.35	-0.9
3,213,551	-		BPHYT_RS33975	0.35	-0.4
3,213,807	+		BPHYT_RS33975	0.53	-0.2
3,214,083	+		BPHYT_RS33975	0.72	-0.3
3,214,083	+		BPHYT_RS33975	0.72	-1.0
3,214,083	+		BPHYT_RS33975	0.72	-0.9
3,214,131	+		BPHYT_RS33975	0.75	-0.9
3,214,218	+		BPHYT_RS33975	0.81	+0.4
3,214,297	+		BPHYT_RS33975	0.87	-0.4
3,214,297	+		BPHYT_RS33975	0.87	-0.7
3,214,464	+				-0.3
3,214,464	+				-1.8
3,214,477	-				-0.9
3,214,485	+				+1.1
3,214,486	-				-0.7
3,214,486	-				-1.8
3,214,490	-				-0.3
3,214,492	+				-0.2
3,214,493	-				-0.4
3,214,493	-				-0.8
3,214,497	+				-0.8
3,214,590	+				-1.9
3,214,591	-				-1.3
3,214,680	-				-1.9
3,214,684	-				-1.7
3,215,085	+		BPHYT_RS33980	0.21	-0.4
3,215,086	-		BPHYT_RS33980	0.21	-0.6
3,215,134	-		BPHYT_RS33980	0.22	+0.5
3,215,134	-		BPHYT_RS33980	0.22	-1.6
3,215,136	+		BPHYT_RS33980	0.22	-2.3
3,215,136	+		BPHYT_RS33980	0.22	-0.9
3,215,253	+		BPHYT_RS33980	0.27	-3.0
3,215,253	+		BPHYT_RS33980	0.27	-2.0
3,215,254	-		BPHYT_RS33980	0.27	-2.2
3,215,455	-		BPHYT_RS33980	0.34	-2.1