Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24915

Experiment: Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.064 mg/ml
1,161,153	+		BPHYT_RS24910	0.80	+0.6
1,161,185	+		BPHYT_RS24910	0.82	+0.2
1,161,185	+		BPHYT_RS24910	0.82	+0.9
1,161,186	-		BPHYT_RS24910	0.82	+0.5
1,161,186	-		BPHYT_RS24910	0.82	+0.3
1,161,744	+				+0.2
1,161,745	-				+2.7
1,161,745	-				+0.2
1,161,769	-				+0.5
1,161,780	+				+0.4
1,161,922	-				+0.6
1,161,944	+		BPHYT_RS24915	0.12	+0.5
1,161,944	+		BPHYT_RS24915	0.12	+0.2
1,161,944	+		BPHYT_RS24915	0.12	+0.4
1,161,945	-		BPHYT_RS24915	0.12	+0.1
1,161,945	-		BPHYT_RS24915	0.12	+1.3
1,161,945	-		BPHYT_RS24915	0.12	+1.8
1,162,069	+		BPHYT_RS24915	0.26	-0.1
1,162,186	+		BPHYT_RS24915	0.39	+1.4
1,162,187	-		BPHYT_RS24915	0.39	+0.7
1,162,387	+		BPHYT_RS24915	0.61	+0.4
1,162,625	-		BPHYT_RS24915	0.87	+1.2
1,162,672	+				+0.4
1,162,849	+				+0.8
1,162,849	+				-0.4
1,162,850	-				-0.6
1,162,922	-				-0.0
1,162,922	-				+0.1
1,162,922	-				+0.1
1,163,560	+		BPHYT_RS24920	0.41	+0.8
1,163,561	-		BPHYT_RS24920	0.41	-0.1
1,163,599	+		BPHYT_RS24920	0.43	-0.8
1,163,599	+		BPHYT_RS24920	0.43	+0.0
1,163,599	+		BPHYT_RS24920	0.43	-2.3