Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS20165
Experiment: Paraquat dichloride 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
65,842 | + | BPHYT_RS20160 | 0.33 | +1.0 | |
65,858 | - | BPHYT_RS20160 | 0.34 | -1.5 | |
66,288 | + | BPHYT_RS20160 | 0.67 | +0.8 | |
66,436 | - | +1.4 | |||
66,580 | - | BPHYT_RS20160 | 0.89 | -0.3 | |
66,750 | + | -1.8 | |||
66,965 | - | BPHYT_RS20165 | 0.19 | -1.7 | |
67,514 | - | BPHYT_RS20165 | 0.63 | -1.4 | |
67,676 | - | BPHYT_RS20165 | 0.76 | -1.2 | |
67,728 | + | BPHYT_RS20165 | 0.81 | -0.7 | |
68,162 | + | -0.7 | |||
68,450 | - | BPHYT_RS20170 | 0.14 | +0.2 | |
68,727 | + | BPHYT_RS20170 | 0.27 | -2.2 |
Or see this region's nucleotide sequence