Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19665

Experiment: Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.064 mg/ml
4,423,684	+				-0.5
4,423,684	+				-0.8
4,423,684	+				-0.2
4,423,684	+				+0.3
4,423,685	-				-0.6
4,423,685	-				-1.6
4,423,685	-				-0.6
4,423,775	+				-0.0
4,423,775	+				-0.8
4,423,776	-				-0.6
4,423,915	+				+0.0
4,423,915	+				-0.6
4,423,915	+				+0.4
4,423,915	+				-0.6
4,423,916	-				-0.3
4,423,948	+				-0.2
4,423,974	+				-2.9
4,424,117	+		BPHYT_RS19660	0.27	-0.4
4,424,118	-				+1.4
4,424,383	-				+0.2
4,424,473	+				+0.8
4,424,501	-				-0.7
4,424,521	-				+1.4
4,424,521	-				+0.3
4,424,614	+				-0.7
4,424,638	+				-0.6
4,424,638	+				-0.5
4,424,638	+				-1.8
4,424,638	+				+0.2
4,424,638	+				+0.9
4,424,638	+				+0.3
4,424,638	+				-0.9
4,424,639	-				-0.6
4,424,657	+				-0.7
4,424,657	+				-0.8
4,424,696	+				-1.0
4,424,697	-		BPHYT_RS19665	0.10	+0.1
4,424,697	-		BPHYT_RS19665	0.10	+0.2
4,424,699	+		BPHYT_RS19665	0.10	+0.6
4,424,700	-		BPHYT_RS19665	0.11	-0.2
4,424,815	+		BPHYT_RS19665	0.32	-1.1
4,424,846	+		BPHYT_RS19665	0.38	-0.2
4,424,846	+		BPHYT_RS19665	0.38	-0.5
4,424,847	-		BPHYT_RS19665	0.38	+1.0
4,424,847	-		BPHYT_RS19665	0.38	+1.4
4,424,847	-		BPHYT_RS19665	0.38	+0.1
4,424,899	+		BPHYT_RS19665	0.47	-0.9
4,424,982	+		BPHYT_RS19665	0.63	-1.4
4,424,983	-		BPHYT_RS19665	0.63	+0.6
4,424,983	-		BPHYT_RS19665	0.63	+0.8
4,425,214	+				-1.2
4,425,215	-				-0.5
4,425,253	+				-1.4
4,425,254	-				+0.8
4,425,743	-		BPHYT_RS19670	0.27	+0.1
4,425,776	+		BPHYT_RS19670	0.29	-1.7
4,425,776	+		BPHYT_RS19670	0.29	-0.3
4,425,777	-		BPHYT_RS19670	0.29	-0.8
4,425,830	-		BPHYT_RS19670	0.33	+1.8
4,425,845	-		BPHYT_RS19670	0.34	+0.4
4,425,845	-		BPHYT_RS19670	0.34	-0.6
4,425,845	-		BPHYT_RS19670	0.34	+0.7
4,425,865	+		BPHYT_RS19670	0.35	-0.3
4,425,865	+		BPHYT_RS19670	0.35	-0.2
4,425,865	+		BPHYT_RS19670	0.35	+0.1
4,425,866	-		BPHYT_RS19670	0.35	-0.4
4,425,866	-		BPHYT_RS19670	0.35	+0.7
4,425,899	+		BPHYT_RS19670	0.37	+0.1
4,425,899	+		BPHYT_RS19670	0.37	+1.2
4,426,100	+		BPHYT_RS19670	0.50	-0.2
4,426,101	-		BPHYT_RS19670	0.50	+0.0
4,426,142	+		BPHYT_RS19670	0.53	-0.2