Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS18945

Experiment: Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.064 mg/ml
4,254,714	-		BPHYT_RS18940	0.59	+0.9
4,254,714	-		BPHYT_RS18940	0.59	+1.1
4,254,851	-		BPHYT_RS18940	0.65	+0.4
4,255,197	-		BPHYT_RS18940	0.82	+1.0
4,255,384	+				+1.5
4,255,385	-				+0.7
4,255,385	-				+1.0
4,255,385	-				+1.2
4,255,606	+				+2.0
4,255,743	+		BPHYT_RS18945	0.14	+0.9
4,255,776	+		BPHYT_RS18945	0.17	+2.6
4,255,950	+		BPHYT_RS18945	0.31	+1.2
4,255,950	+		BPHYT_RS18945	0.31	+1.4
4,256,648	+		BPHYT_RS18945	0.89	+1.1
4,256,649	-		BPHYT_RS18945	0.89	+1.1
4,256,649	-		BPHYT_RS18945	0.89	+1.6
4,256,837	+				+0.7
4,256,838	-				-0.0
4,256,891	-				+0.2
4,257,016	+				-0.8
4,257,017	-				+0.4
4,257,084	+				+0.1
4,257,084	+				-0.2
4,257,084	+				+0.4
4,257,084	+				-0.1
4,257,084	+				+0.8
4,257,084	+				+0.0
4,257,085	-				-0.2
4,257,085	-				-0.2
4,257,085	-				-0.3
4,257,085	-				+0.4
4,257,085	-				+2.1
4,257,085	-				+1.5
4,257,232	+		BPHYT_RS18950	0.16	-0.2
4,257,285	+		BPHYT_RS18950	0.20	-0.6
4,257,285	+		BPHYT_RS18950	0.20	-0.1
4,257,561	+		BPHYT_RS18950	0.41	+1.3
4,257,561	+		BPHYT_RS18950	0.41	+0.0
4,257,639	+		BPHYT_RS18950	0.47	-0.3
4,257,640	-		BPHYT_RS18950	0.47	+0.7