Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS18940

Experiment: Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.064 mg/ml
4,252,776	+		BPHYT_RS18935	0.81	+1.6
4,252,776	+		BPHYT_RS18935	0.81	+1.3
4,252,776	+		BPHYT_RS18935	0.81	+1.5
4,252,777	-		BPHYT_RS18935	0.81	+1.4
4,252,777	-		BPHYT_RS18935	0.81	+1.6
4,253,119	+				+1.3
4,253,119	+				+1.4
4,253,120	-				+2.0
4,253,120	-				+1.3
4,253,120	-				+0.6
4,253,120	-				+1.4
4,253,135	-				+0.4
4,253,174	+				+2.4
4,253,191	-				+0.1
4,253,191	-				+1.6
4,253,191	-				-0.5
4,253,213	-				+0.0
4,253,245	+				+1.3
4,253,245	+				+1.5
4,253,245	+				+2.0
4,253,510	+				+0.4
4,253,511	-				+1.3
4,253,536	+				+1.3
4,253,536	+				+1.2
4,253,536	+				+1.1
4,253,678	+				+0.8
4,253,678	+				+1.0
4,253,679	-				+0.7
4,253,767	-		BPHYT_RS18940	0.14	+1.0
4,253,767	-		BPHYT_RS18940	0.14	+0.1
4,253,775	-		BPHYT_RS18940	0.14	-0.6
4,254,036	+		BPHYT_RS18940	0.27	+0.7
4,254,036	+		BPHYT_RS18940	0.27	+1.2
4,254,037	-		BPHYT_RS18940	0.27	+0.4
4,254,127	+		BPHYT_RS18940	0.31	+0.0
4,254,127	+		BPHYT_RS18940	0.31	+1.0
4,254,128	-		BPHYT_RS18940	0.31	+0.8
4,254,133	+		BPHYT_RS18940	0.31	+1.4
4,254,133	+		BPHYT_RS18940	0.31	+1.1
4,254,133	+		BPHYT_RS18940	0.31	+0.6
4,254,133	+		BPHYT_RS18940	0.31	+1.2
4,254,133	+		BPHYT_RS18940	0.31	+1.4
4,254,134	-		BPHYT_RS18940	0.31	+1.4
4,254,134	-		BPHYT_RS18940	0.31	+0.9
4,254,134	-		BPHYT_RS18940	0.31	+0.9
4,254,162	-		BPHYT_RS18940	0.33	+1.4
4,254,174	-		BPHYT_RS18940	0.33	+0.9
4,254,714	-		BPHYT_RS18940	0.59	+0.9
4,254,714	-		BPHYT_RS18940	0.59	+1.1
4,254,851	-		BPHYT_RS18940	0.65	+0.4
4,255,197	-		BPHYT_RS18940	0.82	+1.0
4,255,384	+				+1.5
4,255,385	-				+0.7
4,255,385	-				+1.0
4,255,385	-				+1.2
4,255,606	+				+2.0
4,255,743	+		BPHYT_RS18945	0.14	+0.9
4,255,776	+		BPHYT_RS18945	0.17	+2.6
4,255,950	+		BPHYT_RS18945	0.31	+1.2
4,255,950	+		BPHYT_RS18945	0.31	+1.4