Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17060
Experiment: Paraquat dichloride 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,865,629 | - | -0.8 | |||
3,865,694 | - | -0.4 | |||
3,865,819 | - | +0.1 | |||
3,865,819 | - | +0.4 | |||
3,865,819 | - | -0.8 | |||
3,865,819 | - | +0.5 | |||
3,865,819 | - | +0.1 | |||
3,865,823 | - | +1.5 | |||
3,865,823 | - | +0.0 | |||
3,865,823 | - | +0.1 | |||
3,865,823 | - | -0.6 | |||
3,865,823 | - | -0.1 | |||
3,865,829 | - | +0.3 | |||
3,865,829 | - | +1.0 | |||
3,865,847 | - | -0.5 | |||
3,866,251 | - | -0.1 | |||
3,866,251 | - | +0.3 | |||
3,866,255 | - | -0.6 | |||
3,866,255 | - | +0.1 | |||
3,866,255 | - | +0.6 | |||
3,866,284 | - | -0.4 | |||
3,866,284 | - | +0.2 | |||
3,866,299 | - | -0.5 | |||
3,869,473 | - | +0.3 | |||
3,869,473 | - | +1.4 | |||
3,869,491 | - | -0.3 | |||
3,869,647 | - | -0.0 | |||
3,869,680 | - | -1.0 | |||
3,869,680 | - | -0.6 | |||
3,869,682 | - | -0.2 | |||
3,869,682 | - | +0.4 | |||
3,869,711 | - | -1.2 | |||
3,869,711 | - | -0.1 |
Or see this region's nucleotide sequence