Experiment: Paraquat dichloride 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS17045 and BPHYT_RS17050 are separated by 30 nucleotides BPHYT_RS17050 and BPHYT_RS17055 are separated by 86 nucleotides BPHYT_RS17055 and BPHYT_RS17060 are separated by 698 nucleotides
BPHYT_RS17045: BPHYT_RS17045 - histone, at 3,863,302 to 3,863,919
_RS17045
BPHYT_RS17050: BPHYT_RS17050 - hypothetical protein, at 3,863,950 to 3,864,276
_RS17050
BPHYT_RS17055: BPHYT_RS17055 - ribonucleotide-diphosphate reductase subunit beta, at 3,864,363 to 3,865,598
_RS17055
BPHYT_RS17060: BPHYT_RS17060 - ribonucleotide-diphosphate reductase subunit alpha, at 3,866,297 to 3,869,302
_RS17060
Position (kb)
3864
3865
3866 Strain fitness (log2 ratio)
-1
0
1 at 3863.686 kb on - strand, within BPHYT_RS17045 at 3864.037 kb on - strand, within BPHYT_RS17050 at 3864.056 kb on - strand, within BPHYT_RS17050 at 3865.629 kb on - strand at 3865.694 kb on - strand at 3865.819 kb on - strand at 3865.819 kb on - strand at 3865.819 kb on - strand at 3865.819 kb on - strand at 3865.819 kb on - strand at 3865.823 kb on - strand at 3865.823 kb on - strand at 3865.823 kb on - strand at 3865.823 kb on - strand at 3865.823 kb on - strand at 3865.829 kb on - strand at 3865.829 kb on - strand at 3865.847 kb on - strand at 3866.251 kb on - strand at 3866.251 kb on - strand at 3866.255 kb on - strand at 3866.255 kb on - strand at 3866.255 kb on - strand at 3866.284 kb on - strand at 3866.284 kb on - strand at 3866.299 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.064 mg/ml remove 3,863,686 - BPHYT_RS17045 0.62 -0.5 3,864,037 - BPHYT_RS17050 0.27 -0.2 3,864,056 - BPHYT_RS17050 0.32 +0.4 3,865,629 - -0.8 3,865,694 - -0.4 3,865,819 - +0.1 3,865,819 - +0.4 3,865,819 - -0.8 3,865,819 - +0.5 3,865,819 - +0.1 3,865,823 - +1.5 3,865,823 - +0.0 3,865,823 - +0.1 3,865,823 - -0.6 3,865,823 - -0.1 3,865,829 - +0.3 3,865,829 - +1.0 3,865,847 - -0.5 3,866,251 - -0.1 3,866,251 - +0.3 3,866,255 - -0.6 3,866,255 - +0.1 3,866,255 - +0.6 3,866,284 - -0.4 3,866,284 - +0.2 3,866,299 - -0.5
Or see this region's nucleotide sequence