Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08945

Experiment: Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.064 mg/ml
2,024,753	-				+0.8
2,024,785	+				+1.4
2,024,786	-				+0.1
2,024,899	-				+1.0
2,024,899	-				-0.2
2,025,084	+		BPHYT_RS08945	0.15	+1.4
2,025,084	+		BPHYT_RS08945	0.15	+3.5
2,025,084	+		BPHYT_RS08945	0.15	+1.9
2,025,085	-		BPHYT_RS08945	0.16	+1.8
2,025,088	+		BPHYT_RS08945	0.17	+1.8
2,025,089	-		BPHYT_RS08945	0.17	+1.4
2,025,339	+		BPHYT_RS08945	0.83	+1.7
2,025,340	-		BPHYT_RS08945	0.84	+1.9
2,025,392	+				+1.4
2,025,392	+				+2.0
2,025,393	-				+2.0
2,025,581	+				+1.5
2,025,582	-				-1.5
2,025,857	+				+0.4
2,025,858	-				-2.3
2,025,858	-				-0.8
2,026,064	+		BPHYT_RS08950	0.21	-0.9
2,026,065	-		BPHYT_RS08950	0.21	+0.1
2,026,065	-		BPHYT_RS08950	0.21	-1.3
2,026,109	+		BPHYT_RS08950	0.24	+0.3
2,026,109	+		BPHYT_RS08950	0.24	+0.1
2,026,109	+		BPHYT_RS08950	0.24	-0.3
2,026,110	-		BPHYT_RS08950	0.24	+0.0
2,026,110	-		BPHYT_RS08950	0.24	+0.0
2,026,110	-		BPHYT_RS08950	0.24	+0.7
2,026,251	-		BPHYT_RS08950	0.36	-0.3
2,026,251	-		BPHYT_RS08950	0.36	+0.1
2,026,251	-		BPHYT_RS08950	0.36	-1.8
2,026,252	+				+0.8
2,026,271	-		BPHYT_RS08950	0.37	-0.1
2,026,367	+		BPHYT_RS08950	0.45	+0.1