Experiment: Paraquat dichloride 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS08605 and BPHYT_RS08610 are separated by 287 nucleotides BPHYT_RS08610 and BPHYT_RS08615 are separated by 176 nucleotides BPHYT_RS08615 and BPHYT_RS08620 are separated by 390 nucleotides
BPHYT_RS08605: BPHYT_RS08605 - hypothetical protein, at 1,963,370 to 1,963,561
_RS08605
BPHYT_RS08610: BPHYT_RS08610 - hypothetical protein, at 1,963,849 to 1,964,127
_RS08610
BPHYT_RS08615: BPHYT_RS08615 - hypothetical protein, at 1,964,304 to 1,964,588
_RS08615
BPHYT_RS08620: BPHYT_RS08620 - epimerase, at 1,964,979 to 1,965,977
_RS08620
Position (kb) 1964
1965 Strain fitness (log2 ratio) -1
0
1 at 1963.561 kb on + strand at 1963.562 kb on - strand at 1963.684 kb on + strand at 1963.685 kb on - strand at 1963.705 kb on + strand at 1963.705 kb on + strand at 1963.709 kb on + strand at 1963.710 kb on - strand at 1963.830 kb on + strand at 1963.885 kb on + strand, within BPHYT_RS08610 at 1963.886 kb on - strand, within BPHYT_RS08610 at 1963.886 kb on - strand, within BPHYT_RS08610 at 1963.960 kb on + strand, within BPHYT_RS08610 at 1963.960 kb on + strand, within BPHYT_RS08610 at 1963.961 kb on - strand, within BPHYT_RS08610 at 1964.010 kb on + strand, within BPHYT_RS08610 at 1964.011 kb on - strand, within BPHYT_RS08610 at 1964.099 kb on - strand, within BPHYT_RS08610 at 1964.232 kb on - strand at 1964.439 kb on + strand, within BPHYT_RS08615 at 1964.631 kb on + strand at 1965.146 kb on - strand, within BPHYT_RS08620 at 1965.251 kb on - strand, within BPHYT_RS08620 at 1965.316 kb on + strand, within BPHYT_RS08620 at 1965.316 kb on + strand, within BPHYT_RS08620 at 1965.317 kb on - strand, within BPHYT_RS08620 at 1965.317 kb on - strand, within BPHYT_RS08620 at 1965.370 kb on + strand, within BPHYT_RS08620 at 1965.370 kb on + strand, within BPHYT_RS08620 at 1965.370 kb on + strand, within BPHYT_RS08620 at 1965.371 kb on - strand, within BPHYT_RS08620 at 1965.478 kb on + strand, within BPHYT_RS08620
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.064 mg/ml remove 1,963,561 + -0.5 1,963,562 - +0.2 1,963,684 + -0.0 1,963,685 - +0.4 1,963,705 + +1.5 1,963,705 + -0.4 1,963,709 + -0.6 1,963,710 - -0.2 1,963,830 + +0.4 1,963,885 + BPHYT_RS08610 0.13 -0.3 1,963,886 - BPHYT_RS08610 0.13 +0.0 1,963,886 - BPHYT_RS08610 0.13 -0.1 1,963,960 + BPHYT_RS08610 0.40 +1.1 1,963,960 + BPHYT_RS08610 0.40 -0.2 1,963,961 - BPHYT_RS08610 0.40 -0.0 1,964,010 + BPHYT_RS08610 0.58 +0.2 1,964,011 - BPHYT_RS08610 0.58 +0.4 1,964,099 - BPHYT_RS08610 0.90 +0.1 1,964,232 - +0.2 1,964,439 + BPHYT_RS08615 0.47 +1.4 1,964,631 + +1.0 1,965,146 - BPHYT_RS08620 0.17 -0.1 1,965,251 - BPHYT_RS08620 0.27 -0.6 1,965,316 + BPHYT_RS08620 0.34 +0.2 1,965,316 + BPHYT_RS08620 0.34 +0.4 1,965,317 - BPHYT_RS08620 0.34 -0.5 1,965,317 - BPHYT_RS08620 0.34 +0.2 1,965,370 + BPHYT_RS08620 0.39 -0.4 1,965,370 + BPHYT_RS08620 0.39 +0.6 1,965,370 + BPHYT_RS08620 0.39 +0.6 1,965,371 - BPHYT_RS08620 0.39 +0.4 1,965,478 + BPHYT_RS08620 0.50 -0.4
Or see this region's nucleotide sequence