Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06935

Experiment: Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.064 mg/ml
1,569,847	+				+0.1
1,569,848	-				-1.1
1,569,865	+				+0.6
1,569,879	+				+0.1
1,569,963	+				-0.9
1,569,964	-				-0.5
1,570,048	-				-1.0
1,570,048	-				+0.4
1,570,079	-				-0.2
1,570,116	-				+0.6
1,570,125	+				-0.5
1,570,126	-				+1.6
1,570,126	-				+0.4
1,570,126	-				-0.1
1,570,126	-				-0.2
1,570,142	+				+0.8
1,570,187	+		BPHYT_RS06930	0.18	-0.6
1,570,222	-		BPHYT_RS06930	0.31	-0.7
1,570,446	-				+0.1
1,570,510	-				+1.8
1,570,812	+		BPHYT_RS06935	0.45	+0.6
1,570,837	-		BPHYT_RS06935	0.50	+0.4
1,570,913	+		BPHYT_RS06935	0.66	+0.2
1,570,914	-		BPHYT_RS06935	0.66	+0.5
1,571,060	-				+0.4
1,571,091	+				-0.5
1,571,103	+				+0.2
1,571,175	-		BPHYT_RS06940	0.18	+0.5
1,571,231	-		BPHYT_RS06940	0.32	+0.5
1,571,316	+		BPHYT_RS06940	0.54	-1.1
1,571,316	+		BPHYT_RS06940	0.54	-0.1
1,571,316	+		BPHYT_RS06940	0.54	+0.9
1,571,330	-		BPHYT_RS06940	0.57	-0.8
1,571,330	-		BPHYT_RS06940	0.57	-1.0
1,571,547	+				+0.5
1,571,548	-				-0.4
1,571,548	-				-0.7
1,571,549	+				-0.7
1,571,549	+				-0.1
1,571,549	+				-0.9
1,571,582	+				+0.3
1,571,582	+				-0.0
1,571,641	+				-0.1
1,571,764	-		BPHYT_RS06945	0.14	-0.3
1,571,900	+		BPHYT_RS06945	0.30	-1.0
1,571,900	+		BPHYT_RS06945	0.30	+0.3
1,571,901	-		BPHYT_RS06945	0.30	-0.7
1,571,901	-		BPHYT_RS06945	0.30	-0.8