Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04035
Experiment: Paraquat dichloride 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
918,446 | - | BPHYT_RS04030 | 0.49 | +0.1 | |
918,458 | - | BPHYT_RS04030 | 0.49 | -0.5 | |
918,463 | + | BPHYT_RS04030 | 0.50 | -0.2 | |
920,322 | + | BPHYT_RS04035 | 0.73 | +0.8 | |
920,323 | - | BPHYT_RS04035 | 0.73 | +1.2 | |
920,329 | - | BPHYT_RS04035 | 0.73 | +0.9 | |
920,329 | - | BPHYT_RS04035 | 0.73 | +0.3 | |
921,252 | - | BPHYT_RS04040 | 0.39 | -0.2 | |
921,281 | - | BPHYT_RS04040 | 0.41 | -0.1 | |
921,385 | + | BPHYT_RS04040 | 0.48 | -0.8 | |
921,468 | + | BPHYT_RS04040 | 0.54 | -0.5 |
Or see this region's nucleotide sequence