Experiment: Paraquat dichloride 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS00510 and BPHYT_RS00515 are separated by 54 nucleotides BPHYT_RS00515 and BPHYT_RS00520 are separated by 193 nucleotides BPHYT_RS00520 and BPHYT_RS00525 are separated by 369 nucleotides
BPHYT_RS00510: BPHYT_RS00510 - S-(hydroxymethyl)glutathione dehydrogenase, at 123,622 to 124,731
_RS00510
BPHYT_RS00515: BPHYT_RS00515 - regulator, at 124,786 to 125,061
_RS00515
BPHYT_RS00520: BPHYT_RS00520 - glutamate--cysteine ligase, at 125,255 to 126,853
_RS00520
BPHYT_RS00525: BPHYT_RS00525 - aldehyde dismutase, at 127,223 to 128,437
_RS00525
Position (kb) 125
126
127 Strain fitness (log2 ratio) -2
-1
0
1
2 at 124.295 kb on - strand, within BPHYT_RS00510 at 124.328 kb on + strand, within BPHYT_RS00510 at 124.329 kb on - strand, within BPHYT_RS00510 at 124.352 kb on + strand, within BPHYT_RS00510 at 124.369 kb on - strand, within BPHYT_RS00510 at 124.608 kb on + strand, within BPHYT_RS00510 at 124.747 kb on - strand at 125.054 kb on + strand at 125.082 kb on - strand at 125.095 kb on + strand at 125.218 kb on - strand at 125.256 kb on + strand at 125.256 kb on + strand at 125.398 kb on + strand at 125.955 kb on + strand, within BPHYT_RS00520 at 126.034 kb on - strand, within BPHYT_RS00520 at 126.036 kb on - strand, within BPHYT_RS00520 at 126.078 kb on + strand, within BPHYT_RS00520 at 126.096 kb on + strand, within BPHYT_RS00520 at 126.108 kb on - strand, within BPHYT_RS00520 at 126.174 kb on + strand, within BPHYT_RS00520 at 126.174 kb on + strand, within BPHYT_RS00520 at 126.279 kb on + strand, within BPHYT_RS00520 at 126.280 kb on - strand, within BPHYT_RS00520 at 126.307 kb on + strand, within BPHYT_RS00520 at 126.307 kb on + strand, within BPHYT_RS00520 at 126.308 kb on - strand, within BPHYT_RS00520 at 126.309 kb on + strand, within BPHYT_RS00520 at 126.310 kb on - strand, within BPHYT_RS00520 at 126.310 kb on - strand, within BPHYT_RS00520 at 126.399 kb on + strand, within BPHYT_RS00520 at 126.399 kb on + strand, within BPHYT_RS00520 at 126.399 kb on + strand, within BPHYT_RS00520 at 126.427 kb on + strand, within BPHYT_RS00520 at 126.495 kb on + strand, within BPHYT_RS00520 at 126.495 kb on + strand at 126.495 kb on + strand, within BPHYT_RS00520 at 126.496 kb on - strand, within BPHYT_RS00520 at 126.496 kb on - strand, within BPHYT_RS00520 at 126.496 kb on - strand, within BPHYT_RS00520 at 126.848 kb on - strand at 126.849 kb on + strand at 126.850 kb on - strand at 126.850 kb on - strand at 126.883 kb on - strand at 126.924 kb on + strand at 126.996 kb on - strand at 127.022 kb on - strand at 127.101 kb on - strand at 127.185 kb on + strand at 127.217 kb on - strand at 127.257 kb on + strand at 127.257 kb on + strand at 127.290 kb on + strand at 127.290 kb on + strand at 127.348 kb on - strand, within BPHYT_RS00525 at 127.512 kb on + strand, within BPHYT_RS00525 at 127.552 kb on - strand, within BPHYT_RS00525 at 127.632 kb on + strand, within BPHYT_RS00525 at 127.632 kb on + strand, within BPHYT_RS00525
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.064 mg/ml remove 124,295 - BPHYT_RS00510 0.61 +0.7 124,328 + BPHYT_RS00510 0.64 -0.7 124,329 - BPHYT_RS00510 0.64 -0.9 124,352 + BPHYT_RS00510 0.66 -0.8 124,369 - BPHYT_RS00510 0.67 +0.1 124,608 + BPHYT_RS00510 0.89 +0.7 124,747 - +0.5 125,054 + -0.9 125,082 - +0.9 125,095 + -0.2 125,218 - +1.9 125,256 + -0.1 125,256 + -0.1 125,398 + -1.7 125,955 + BPHYT_RS00520 0.44 +0.5 126,034 - BPHYT_RS00520 0.49 +1.9 126,036 - BPHYT_RS00520 0.49 +0.4 126,078 + BPHYT_RS00520 0.51 -0.7 126,096 + BPHYT_RS00520 0.53 +0.5 126,108 - BPHYT_RS00520 0.53 -0.8 126,174 + BPHYT_RS00520 0.57 -0.1 126,174 + BPHYT_RS00520 0.57 +0.8 126,279 + BPHYT_RS00520 0.64 +1.8 126,280 - BPHYT_RS00520 0.64 +0.9 126,307 + BPHYT_RS00520 0.66 +0.0 126,307 + BPHYT_RS00520 0.66 +0.6 126,308 - BPHYT_RS00520 0.66 -0.9 126,309 + BPHYT_RS00520 0.66 +0.3 126,310 - BPHYT_RS00520 0.66 -1.8 126,310 - BPHYT_RS00520 0.66 +0.1 126,399 + BPHYT_RS00520 0.72 +0.7 126,399 + BPHYT_RS00520 0.72 -0.2 126,399 + BPHYT_RS00520 0.72 +1.4 126,427 + BPHYT_RS00520 0.73 +0.1 126,495 + BPHYT_RS00520 0.78 -0.2 126,495 + +1.4 126,495 + BPHYT_RS00520 0.78 +0.9 126,496 - BPHYT_RS00520 0.78 -1.0 126,496 - BPHYT_RS00520 0.78 +0.4 126,496 - BPHYT_RS00520 0.78 -0.3 126,848 - -0.0 126,849 + +0.2 126,850 - -1.2 126,850 - -0.1 126,883 - -0.6 126,924 + +0.2 126,996 - -0.9 127,022 - -0.1 127,101 - -0.2 127,185 + -0.4 127,217 - +0.4 127,257 + -0.9 127,257 + +0.5 127,290 + +1.2 127,290 + +0.0 127,348 - BPHYT_RS00525 0.10 +1.2 127,512 + BPHYT_RS00525 0.24 +0.4 127,552 - BPHYT_RS00525 0.27 +0.9 127,632 + BPHYT_RS00525 0.34 -1.2 127,632 + BPHYT_RS00525 0.34 -1.1
Or see this region's nucleotide sequence