Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3033

Experiment: KB with Nitrofurantoin 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nitrofurantoin 125 ug/ml
3,630,690	+				-0.9
3,630,691	-				-0.2
3,630,787	-				-2.3
3,631,069	+		Psyr_3032	0.40	+0.2
3,631,069	+		Psyr_3032	0.40	+0.3
3,631,070	-		Psyr_3032	0.40	-0.7
3,631,145	+		Psyr_3032	0.56	-1.0
3,631,145	+		Psyr_3032	0.56	-0.8
3,631,146	-		Psyr_3032	0.56	-1.0
3,631,146	-		Psyr_3032	0.56	-0.2
3,631,146	-		Psyr_3032	0.56	-1.4
3,631,146	-		Psyr_3032	0.56	-0.6
3,631,224	+		Psyr_3032	0.72	+1.0
3,631,255	+		Psyr_3032	0.79	+0.1
3,631,256	-		Psyr_3032	0.79	-0.2
3,631,258	-		Psyr_3032	0.79	+1.8
3,631,355	-				+0.2
3,631,374	+				+0.3
3,631,643	+		Psyr_3033	0.18	+0.8
3,631,644	-		Psyr_3033	0.18	-0.1
3,631,644	-		Psyr_3033	0.18	+0.3
3,631,666	+		Psyr_3033	0.20	-1.3
3,631,666	+		Psyr_3033	0.20	+0.6
3,631,667	-		Psyr_3033	0.21	+0.1
3,631,705	+		Psyr_3033	0.25	-0.2
3,631,711	+		Psyr_3033	0.26	+2.9
3,631,723	+		Psyr_3033	0.27	-0.3
3,631,724	-		Psyr_3033	0.27	-1.2
3,631,787	-		Psyr_3033	0.34	-0.2
3,631,787	-		Psyr_3033	0.34	+0.1
3,631,999	+		Psyr_3033	0.58	-1.0
3,631,999	+		Psyr_3033	0.58	-0.4
3,631,999	+		Psyr_3033	0.58	-0.2
3,631,999	+		Psyr_3033	0.58	+0.0
3,631,999	+		Psyr_3033	0.58	-0.4
3,632,248	+		Psyr_3033	0.87	+0.3
3,632,248	+		Psyr_3033	0.87	+0.1
3,632,248	+		Psyr_3033	0.87	-1.6
3,632,335	+				-0.1
3,632,336	-				-0.0
3,632,338	+				+1.1
3,632,338	+				-0.3
3,632,338	+				-0.6
3,632,338	+				+0.4
3,632,339	-				+0.6
3,632,339	-				+0.6
3,632,363	-				+2.2
3,632,560	-				+0.9
3,632,580	+				-2.1
3,632,580	+				+0.3
3,632,580	+				+0.2
3,632,581	-				+0.7
3,632,581	-				+0.9
3,632,695	+				+1.3
3,632,695	+				+0.3
3,632,698	+				-0.1
3,632,698	+				-0.6
3,632,725	-				+0.6
3,632,730	+				+0.0
3,632,731	-				+0.5
3,632,912	+				-2.4
3,633,178	+				-0.7
3,633,184	+				-0.4
3,633,184	+				+0.2
3,633,185	-				+0.1
3,633,269	+				-0.1
3,633,306	+		Psyr_3034	0.20	-0.1
3,633,307	-		Psyr_3034	0.20	-0.0
3,633,307	-		Psyr_3034	0.20	-0.4
3,633,307	-		Psyr_3034	0.20	-0.7
3,633,335	+		Psyr_3034	0.29	-0.2