Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2983

Experiment: KB with Nitrofurantoin 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nitrofurantoin 125 ug/ml
3,574,522	-				-0.3
3,574,522	-				-1.0
3,574,522	-				+0.4
3,574,522	-				+0.9
3,574,522	-				-0.2
3,574,573	+				+0.4
3,574,573	+				+0.8
3,574,574	-				-2.8
3,574,574	-				-1.4
3,574,574	-				-0.7
3,574,605	+				+0.6
3,574,605	+				+0.5
3,574,605	+				-0.4
3,574,605	+				+0.6
3,574,605	+				-0.2
3,574,606	-				-0.8
3,574,606	-				-0.2
3,574,609	-				+0.1
3,574,646	+				-0.2
3,574,730	+		Psyr_2981	0.23	-0.1
3,574,730	+		Psyr_2981	0.23	+0.5
3,574,943	+				-1.0
3,574,944	-				-0.4
3,575,118	+		Psyr_2982	0.33	+0.3
3,575,282	+		Psyr_2982	0.79	-0.4
3,575,282	+		Psyr_2982	0.79	+2.9
3,575,282	+		Psyr_2982	0.79	-0.4
3,575,282	+		Psyr_2982	0.79	+1.0
3,575,282	+		Psyr_2982	0.79	+0.4
3,575,283	-		Psyr_2982	0.80	-0.2
3,575,283	-		Psyr_2982	0.80	+1.0
3,575,283	-		Psyr_2982	0.80	-0.2
3,575,334	+				-0.4
3,575,334	+				-1.4
3,575,337	+				+1.0
3,575,337	+				-0.4
3,575,337	+				-0.2
3,575,338	-				-1.1
3,575,338	-				-0.2
3,575,369	+				-0.1
3,575,369	+				-1.6
3,575,370	-				+0.2
3,575,370	-				+0.4
3,575,379	-				-0.2
3,575,399	+				+1.2
3,575,399	+				-0.3
3,575,399	+				+0.0
3,575,400	-				-1.7
3,575,400	-				-1.4
3,575,400	-				+0.9
3,575,442	-				-1.4
3,575,442	-				+0.3
3,575,533	-				+0.6
3,575,533	-				+0.9
3,575,596	+		Psyr_2983	0.24	-0.2
3,575,654	+		Psyr_2983	0.43	-1.2
3,575,654	+		Psyr_2983	0.43	+0.3
3,575,654	+		Psyr_2983	0.43	+0.6
3,575,654	+		Psyr_2983	0.43	-0.4
3,575,654	+		Psyr_2983	0.43	+0.1
3,575,655	-		Psyr_2983	0.43	+0.6
3,575,655	-		Psyr_2983	0.43	+0.6
3,575,655	-		Psyr_2983	0.43	-0.7
3,575,655	-		Psyr_2983	0.43	+0.8
3,575,655	-		Psyr_2983	0.43	-0.2
3,575,655	-		Psyr_2983	0.43	-0.1
3,575,655	-		Psyr_2983	0.43	-0.3
3,575,655	-		Psyr_2983	0.43	+1.2
3,575,655	-		Psyr_2983	0.43	+1.6
3,575,655	-		Psyr_2983	0.43	-0.2
3,575,655	-		Psyr_2983	0.43	-0.4
3,575,884	+		Psyr_2984	0.23	-0.9
3,575,991	+		Psyr_2984	0.81	+0.0
3,575,991	+		Psyr_2984	0.81	-0.1
3,575,992	-		Psyr_2984	0.82	+2.4
3,575,992	-		Psyr_2984	0.82	-0.1
3,576,025	+				+1.2
3,576,025	+				+0.6
3,576,368	+		Psyr_2985	0.46	+1.9
3,576,368	+		Psyr_2985	0.46	-1.7
3,576,368	+		Psyr_2985	0.46	-1.0
3,576,451	-		Psyr_2985	0.59	+0.9
3,576,451	-		Psyr_2985	0.59	-2.0
3,576,493	+		Psyr_2985	0.65	-1.0
3,576,782	-				-1.7
3,576,782	-				-1.1
3,576,807	+				-2.0
3,576,807	+				-0.4
3,576,807	+				-0.7
3,576,808	-				+0.4