Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2622

Experiment: KB with Nitrofurantoin 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nitrofurantoin 125 ug/ml
3,179,182	-		Psyr_2621	0.37	+0.1
3,179,568	-		Psyr_2621	0.72	-0.2
3,179,568	-		Psyr_2621	0.72	+1.0
3,179,568	-		Psyr_2621	0.72	+0.7
3,179,609	+		Psyr_2621	0.75	-0.0
3,179,609	+		Psyr_2621	0.75	-1.0
3,179,609	+		Psyr_2621	0.75	+0.1
3,179,610	-		Psyr_2621	0.75	+0.2
3,179,610	-		Psyr_2621	0.75	+0.6
3,179,610	-		Psyr_2621	0.75	-0.3
3,179,693	+		Psyr_2621	0.83	+0.7
3,179,693	+		Psyr_2621	0.83	+0.8
3,179,693	+		Psyr_2621	0.83	+0.3
3,179,693	+		Psyr_2621	0.83	+0.5
3,179,694	-		Psyr_2621	0.83	-1.4
3,179,933	+				-1.2
3,180,200	+		Psyr_2622	0.11	+0.8
3,180,280	-		Psyr_2622	0.13	+0.5
3,180,298	+		Psyr_2622	0.14	-0.9
3,180,298	+		Psyr_2622	0.14	-0.2
3,180,298	+		Psyr_2622	0.14	-0.0
3,180,299	-		Psyr_2622	0.14	-1.5
3,180,299	-		Psyr_2622	0.14	+1.0
3,180,299	-		Psyr_2622	0.14	+0.4
3,180,299	-				+1.5
3,180,381	-		Psyr_2622	0.17	+0.5
3,180,381	-		Psyr_2622	0.17	+1.1
3,180,801	-		Psyr_2622	0.30	+1.3
3,180,874	-		Psyr_2622	0.33	-0.9
3,180,887	-		Psyr_2622	0.33	-0.1
3,180,900	-		Psyr_2622	0.34	-1.1
3,180,900	-		Psyr_2622	0.34	+1.2
3,180,984	-		Psyr_2622	0.36	+0.3
3,180,984	-		Psyr_2622	0.36	+0.5
3,181,004	-		Psyr_2622	0.37	+0.3
3,181,205	+		Psyr_2622	0.44	-0.9
3,181,337	+				-0.5
3,181,338	-		Psyr_2622	0.48	+1.5
3,181,387	+		Psyr_2622	0.50	-0.2
3,181,886	+		Psyr_2622	0.66	+0.7
3,182,168	+		Psyr_2622	0.75	+1.0
3,182,168	+		Psyr_2622	0.75	+0.3
3,182,169	-		Psyr_2622	0.75	+0.8
3,182,244	+				+1.5
3,182,244	+		Psyr_2622	0.78	-1.5
3,182,245	-		Psyr_2622	0.78	+0.3
3,182,339	+		Psyr_2622	0.81	+0.7
3,182,340	-		Psyr_2622	0.81	+1.5
3,182,424	+		Psyr_2622	0.84	-0.5
3,182,424	+		Psyr_2622	0.84	+1.4
3,182,424	+		Psyr_2622	0.84	-0.1
3,182,425	-		Psyr_2622	0.84	-2.5
3,182,425	-		Psyr_2622	0.84	+0.5
3,182,425	-		Psyr_2622	0.84	+1.3
3,182,425	-		Psyr_2622	0.84	+1.0
3,182,425	-		Psyr_2622	0.84	-0.2
3,182,426	+		Psyr_2622	0.84	+1.1
3,182,427	-		Psyr_2622	0.84	-0.5
3,182,428	+		Psyr_2622	0.84	+2.9
3,182,460	+		Psyr_2622	0.85	-0.9
3,182,461	-		Psyr_2622	0.85	-0.5
3,182,822	+				+1.1
3,182,823	-				-2.8
3,182,825	+				-0.2
3,182,825	+				-0.5
3,182,826	-				-2.0
3,182,826	-				-0.0
3,182,853	+				+0.2
3,182,853	+				-0.0
3,182,857	+				+0.8
3,182,857	+				+0.5
3,182,858	-				+0.5
3,183,072	-				+0.3
3,183,096	+				-0.8
3,183,097	-				-0.0
3,183,098	+				-0.4
3,183,098	+				-0.9
3,183,098	+				+0.0
3,183,099	-				+0.2
3,183,099	-				+1.5
3,183,099	-				-0.0
3,183,099	-				-0.8
3,183,099	-				-1.0
3,183,301	+		Psyr_2623	0.24	+0.8
3,183,565	-		Psyr_2623	0.45	-1.0
3,183,565	-		Psyr_2623	0.45	-0.2
3,183,592	+		Psyr_2623	0.48	-0.5
3,183,673	-		Psyr_2623	0.54	+2.1
3,183,673	-		Psyr_2623	0.54	-1.9
3,183,673	-		Psyr_2623	0.54	+2.0
3,183,677	-		Psyr_2623	0.54	+0.5
3,183,740	+		Psyr_2623	0.59	+0.3
3,183,741	-		Psyr_2623	0.59	-1.6
3,183,741	-		Psyr_2623	0.59	-0.0
3,183,743	+		Psyr_2623	0.60	+0.8
3,183,744	-		Psyr_2623	0.60	+1.0
3,183,764	+		Psyr_2623	0.61	-0.5
3,183,904	+		Psyr_2623	0.72	+2.1
3,183,904	+		Psyr_2623	0.72	-1.2
3,183,904	+		Psyr_2623	0.72	+1.7
3,183,905	-		Psyr_2623	0.72	-0.5
3,183,906	+		Psyr_2623	0.72	-1.3
3,183,907	-		Psyr_2623	0.73	-0.9