Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1987

Experiment: KB with Nitrofurantoin 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nitrofurantoin 125 ug/ml
2,307,281	+				+0.8
2,307,357	+				+0.6
2,307,357	+				+0.4
2,307,360	-				-2.4
2,307,360	-				-1.0
2,307,360	-				-0.8
2,307,360	-				+0.7
2,307,910	+		Psyr_1987	0.51	+1.0
2,307,910	+		Psyr_1987	0.51	+0.8
2,308,152	+		Psyr_1987	0.75	+1.6
2,308,269	+		Psyr_1987	0.86	+0.1
2,308,269	+		Psyr_1987	0.86	+0.4
2,308,882	-		Psyr_1988	0.75	+1.0
2,308,905	-		Psyr_1988	0.78	+0.6
2,308,905	-		Psyr_1988	0.78	-0.8
2,308,905	-		Psyr_1988	0.78	-0.6
2,308,905	-		Psyr_1988	0.78	+0.0
2,308,999	+				-0.1
2,308,999	+				-0.5
2,309,000	-				-0.5
2,309,000	-				-1.2
2,309,000	-				-0.1
2,309,000	-				-0.6
2,309,000	-				-0.8
2,309,000	-				-0.4
2,309,000	-				-1.0
2,309,085	-				-0.5
2,309,263	+		Psyr_1989	0.17	-0.7
2,309,263	+		Psyr_1989	0.17	+2.6