Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1799

Experiment: KB with Nitrofurantoin 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nitrofurantoin 125 ug/ml
2,071,877	+		Psyr_1798	0.66	-0.6
2,071,878	-		Psyr_1798	0.66	+0.7
2,072,254	-		Psyr_1798	0.85	-2.2
2,072,444	+				-0.6
2,072,445	-				-0.7
2,072,566	+				-0.9
2,072,744	+		Psyr_1799	0.15	+0.6
2,072,745	-		Psyr_1799	0.15	+0.2
2,072,795	+		Psyr_1799	0.21	+0.3
2,072,796	-		Psyr_1799	0.21	-0.0
2,072,796	-		Psyr_1799	0.21	+0.2
2,072,867	-		Psyr_1799	0.28	+0.7
2,073,016	-		Psyr_1799	0.44	+1.0
2,073,074	+		Psyr_1799	0.51	-0.7
2,073,074	+		Psyr_1799	0.51	+0.6
2,073,075	-		Psyr_1799	0.51	+0.9
2,073,075	-		Psyr_1799	0.51	+0.4
2,073,075	-		Psyr_1799	0.51	-0.4
2,073,254	+		Psyr_1799	0.70	-0.4
2,073,255	-		Psyr_1799	0.70	-0.5
2,073,524	+				-0.3
2,073,525	-				-0.1
2,073,525	-				-0.1
2,073,525	-				+1.0
2,073,546	-				+0.2
2,073,699	-		Psyr_1800	0.11	+0.6
2,073,699	-		Psyr_1800	0.11	-0.4
2,074,002	+		Psyr_1800	0.46	+0.5
2,074,240	+		Psyr_1800	0.74	-0.1
2,074,241	-		Psyr_1800	0.74	+0.2
2,074,241	-		Psyr_1800	0.74	+0.1
2,074,450	-				-0.9
2,074,450	-				+0.6