Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2189

Experiment: L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate (C)
2,500,881	-		Pf1N1B4_2188	0.53	+0.5
2,501,047	+		Pf1N1B4_2188	0.66	-0.6
2,501,122	+		Pf1N1B4_2188	0.72	-1.2
2,501,122	+		Pf1N1B4_2188	0.72	-0.8
2,501,382	+				+0.2
2,501,411	+				-0.6
2,501,480	+				-0.2
2,501,480	+				-1.2
2,501,481	-				-0.6
2,501,481	-				+0.4
2,501,481	-				-0.1
2,501,481	-				-1.2
2,501,481	-				+0.4
2,501,481	-				-0.2
2,501,481	-				-0.8
2,501,481	-				+0.1
2,501,481	-				+0.6
2,501,481	-				-0.6
2,501,481	-				+1.8
2,501,481	-				-0.4
2,501,481	-				-0.0
2,501,481	-				-0.6
2,501,484	+				-0.2
2,501,484	+				+0.1
2,501,484	+				+2.8
2,501,484	+				+0.4
2,501,484	+				-1.2
2,501,484	+				+0.1
2,501,484	+				-0.6
2,501,484	+				-0.7
2,501,485	-				+0.8
2,501,485	-				-2.2
2,501,485	-				-0.3
2,501,485	-				+1.8
2,501,485	-				-0.7
2,501,485	-				+0.5
2,501,485	-				+0.5
2,501,485	-				+0.8
2,501,485	-				+0.4
2,501,485	-				-0.7
2,501,525	-				+1.5
2,501,562	-				-0.2
2,501,654	+				+0.5
2,501,654	+				-0.8
2,501,655	-				+0.6
2,501,655	-				-0.2
2,501,655	-				-0.6
2,501,677	-				+1.0
2,501,686	+				-0.8
2,501,686	+				+0.9
2,501,686	+				-0.1
2,501,686	+				-1.6
2,501,686	+				+0.4
2,501,686	+				+1.6
2,501,687	-				-0.4
2,501,687	-				+2.2
2,501,687	-				-1.4
2,501,687	-				-0.5
2,501,687	-				+0.4
2,501,687	-				+0.3
2,501,687	-				-0.4
2,501,721	+				+1.2
2,501,798	+				+0.3
2,501,798	+				-1.1
2,501,900	+		Pf1N1B4_2189	0.15	-1.0
2,501,900	+		Pf1N1B4_2189	0.15	-2.1
2,502,020	+		Pf1N1B4_2189	0.37	-2.5
2,502,021	-		Pf1N1B4_2189	0.37	-1.8
2,502,148	+		Pf1N1B4_2189	0.60	-0.0
2,502,148	+		Pf1N1B4_2189	0.60	+0.8
2,502,149	-		Pf1N1B4_2189	0.60	-0.1
2,502,149	-		Pf1N1B4_2189	0.60	+0.2
2,502,149	-		Pf1N1B4_2189	0.60	-1.4
2,502,365	+				+0.2
2,502,375	+				+0.5
2,502,375	+				+1.1
2,502,375	+				+1.4
2,502,384	+				-0.7
2,502,385	-				+0.1
2,502,385	-				-1.0
2,502,385	-				-1.4
2,502,395	+				+0.2
2,502,395	+				-0.3
2,502,422	+				-0.0
2,502,450	+				+0.8
2,502,450	+				+0.5
2,502,450	+				-1.0
2,502,450	+				+1.8
2,502,451	-				+2.2
2,502,451	-				+0.6
2,502,451	-				-1.1
2,502,451	-				-0.6
2,502,451	-				+0.1
2,502,451	-				+0.9
2,502,451	-				+1.4
2,502,451	-				-0.1
2,502,451	-				+1.1
2,502,510	+				-0.4
2,502,510	+				+0.1
2,502,511	-				+0.7
2,502,511	-				-1.4
2,502,511	-				+0.2
2,502,511	-				-0.2
2,502,643	+		Pf1N1B4_2190	0.21	-0.0
2,502,643	+				+0.8
2,502,643	+		Pf1N1B4_2190	0.21	+0.2
2,502,644	-		Pf1N1B4_2190	0.21	-0.0
2,502,644	-		Pf1N1B4_2190	0.21	+0.6
2,502,644	-		Pf1N1B4_2190	0.21	-0.7
2,502,724	+		Pf1N1B4_2190	0.39	+0.9
2,502,724	+		Pf1N1B4_2190	0.39	+0.8
2,502,724	+		Pf1N1B4_2190	0.39	-1.0
2,502,725	-		Pf1N1B4_2190	0.39	-0.0
2,502,725	-		Pf1N1B4_2190	0.39	+1.2
2,502,751	+		Pf1N1B4_2190	0.44	+0.8
2,502,751	+		Pf1N1B4_2190	0.44	+0.6
2,502,751	+		Pf1N1B4_2190	0.44	-0.7
2,502,751	+		Pf1N1B4_2190	0.44	+0.5
2,502,752	-		Pf1N1B4_2190	0.45	-2.1
2,502,752	-		Pf1N1B4_2190	0.45	-0.3
2,502,752	-		Pf1N1B4_2190	0.45	+0.3
2,502,789	+		Pf1N1B4_2190	0.53	+0.8
2,502,820	+		Pf1N1B4_2190	0.59	+1.3
2,502,869	+		Pf1N1B4_2190	0.70	+0.8
2,502,869	+		Pf1N1B4_2190	0.70	+0.9
2,502,869	+		Pf1N1B4_2190	0.70	-0.3
2,502,869	+		Pf1N1B4_2190	0.70	-1.8
2,502,869	+		Pf1N1B4_2190	0.70	+0.2
2,502,869	+		Pf1N1B4_2190	0.70	-1.0
2,502,869	+		Pf1N1B4_2190	0.70	+0.3
2,502,869	+		Pf1N1B4_2190	0.70	+0.4
2,502,869	+		Pf1N1B4_2190	0.70	-0.5
2,502,869	+		Pf1N1B4_2190	0.70	-0.9
2,502,869	+		Pf1N1B4_2190	0.70	+0.8
2,502,869	+		Pf1N1B4_2190	0.70	-0.2
2,502,869	+		Pf1N1B4_2190	0.70	-0.4
2,502,869	+		Pf1N1B4_2190	0.70	+2.2
2,502,870	-		Pf1N1B4_2190	0.70	+0.3
2,502,870	-		Pf1N1B4_2190	0.70	+1.2
2,502,870	-		Pf1N1B4_2190	0.70	-0.1
2,502,870	-		Pf1N1B4_2190	0.70	+0.0
2,503,076	+				-0.0
2,503,076	+				+1.8
2,503,077	-				-0.0
2,503,151	-		Pf1N1B4_2191	0.12	+1.6
2,503,151	-		Pf1N1B4_2191	0.12	+0.2
2,503,235	+		Pf1N1B4_2191	0.25	-0.6
2,503,235	+		Pf1N1B4_2191	0.25	-0.8
2,503,235	+		Pf1N1B4_2191	0.25	+0.3
2,503,236	-		Pf1N1B4_2191	0.25	-0.4
2,503,236	-		Pf1N1B4_2191	0.25	-1.6
2,503,303	+		Pf1N1B4_2191	0.35	+0.8
2,503,303	+		Pf1N1B4_2191	0.35	-1.8
2,503,303	+		Pf1N1B4_2191	0.35	+1.8
2,503,303	+		Pf1N1B4_2191	0.35	-0.8
2,503,303	+		Pf1N1B4_2191	0.35	+0.4
2,503,303	+		Pf1N1B4_2191	0.35	-0.6
2,503,303	+		Pf1N1B4_2191	0.35	-0.0
2,503,303	+		Pf1N1B4_2191	0.35	-0.8
2,503,303	+		Pf1N1B4_2191	0.35	+0.8
2,503,303	+		Pf1N1B4_2191	0.35	-0.7
2,503,303	+		Pf1N1B4_2191	0.35	-0.4
2,503,303	+		Pf1N1B4_2191	0.35	+1.2
2,503,303	+		Pf1N1B4_2191	0.35	-1.7
2,503,303	+		Pf1N1B4_2191	0.35	-1.5
2,503,304	-		Pf1N1B4_2191	0.35	-2.1
2,503,304	-		Pf1N1B4_2191	0.35	+1.8
2,503,304	-		Pf1N1B4_2191	0.35	+0.3
2,503,304	-		Pf1N1B4_2191	0.35	-0.6
2,503,304	-		Pf1N1B4_2191	0.35	-1.2
2,503,304	-		Pf1N1B4_2191	0.35	-0.8
2,503,304	-		Pf1N1B4_2191	0.35	-1.7
2,503,304	-		Pf1N1B4_2191	0.35	-1.8
2,503,304	-		Pf1N1B4_2191	0.35	-0.4
2,503,304	-		Pf1N1B4_2191	0.35	-1.4
2,503,304	-		Pf1N1B4_2191	0.35	+0.8
2,503,304	-		Pf1N1B4_2191	0.35	+0.5
2,503,304	-		Pf1N1B4_2191	0.35	-0.3