Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS21880 and HSERO_RS21885 are separated by 174 nucleotides HSERO_RS21885 and HSERO_RS21890 overlap by 4 nucleotides HSERO_RS21890 and HSERO_RS21895 are separated by 8 nucleotides
HSERO_RS21880: HSERO_RS21880 - FAD-dependent oxidoreductase, at 5,008,646 to 5,009,785
_RS21880
HSERO_RS21885: HSERO_RS21885 - nuclease PIN, at 5,009,960 to 5,010,643
_RS21885
HSERO_RS21890: HSERO_RS21890 - hypothetical protein, at 5,010,640 to 5,011,392
_RS21890
HSERO_RS21895: HSERO_RS21895 - TonB-dependent receptor, at 5,011,401 to 5,013,746
_RS21895
Position (kb) 5009
5010
5011 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5008.964 kb on + strand, within HSERO_RS21880 at 5009.027 kb on + strand, within HSERO_RS21880 at 5009.028 kb on + strand, within HSERO_RS21880 at 5009.065 kb on + strand at 5009.094 kb on + strand, within HSERO_RS21880 at 5009.104 kb on + strand, within HSERO_RS21880 at 5009.157 kb on + strand, within HSERO_RS21880 at 5009.173 kb on - strand, within HSERO_RS21880 at 5009.214 kb on - strand, within HSERO_RS21880 at 5009.323 kb on - strand, within HSERO_RS21880 at 5009.338 kb on - strand, within HSERO_RS21880 at 5009.678 kb on + strand at 5009.683 kb on + strand at 5009.686 kb on - strand at 5009.792 kb on - strand at 5009.894 kb on + strand at 5010.102 kb on - strand, within HSERO_RS21885 at 5010.177 kb on - strand, within HSERO_RS21885 at 5010.268 kb on - strand, within HSERO_RS21885 at 5010.622 kb on - strand at 5010.623 kb on - strand at 5010.655 kb on + strand at 5011.182 kb on + strand, within HSERO_RS21890 at 5011.217 kb on + strand, within HSERO_RS21890 at 5011.222 kb on + strand, within HSERO_RS21890 at 5011.251 kb on + strand, within HSERO_RS21890 at 5011.316 kb on - strand, within HSERO_RS21890 at 5011.424 kb on + strand at 5011.432 kb on - strand at 5011.432 kb on - strand at 5011.432 kb on - strand at 5011.432 kb on - strand at 5011.453 kb on + strand at 5011.460 kb on + strand at 5011.468 kb on - strand at 5011.626 kb on + strand at 5011.634 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 5,008,964 + HSERO_RS21880 0.28 -0.0 5,009,027 + HSERO_RS21880 0.33 +0.6 5,009,028 + HSERO_RS21880 0.34 -0.3 5,009,065 + +1.3 5,009,094 + HSERO_RS21880 0.39 +1.7 5,009,104 + HSERO_RS21880 0.40 -0.0 5,009,157 + HSERO_RS21880 0.45 -1.0 5,009,173 - HSERO_RS21880 0.46 +0.9 5,009,214 - HSERO_RS21880 0.50 -0.3 5,009,323 - HSERO_RS21880 0.59 +0.3 5,009,338 - HSERO_RS21880 0.61 +0.0 5,009,678 + -2.4 5,009,683 + -0.1 5,009,686 - -2.4 5,009,792 - +0.8 5,009,894 + +0.6 5,010,102 - HSERO_RS21885 0.21 -0.2 5,010,177 - HSERO_RS21885 0.32 +0.4 5,010,268 - HSERO_RS21885 0.45 -0.1 5,010,622 - +0.0 5,010,623 - -0.4 5,010,655 + -2.7 5,011,182 + HSERO_RS21890 0.72 -1.0 5,011,217 + HSERO_RS21890 0.77 -2.2 5,011,222 + HSERO_RS21890 0.77 -1.0 5,011,251 + HSERO_RS21890 0.81 -1.6 5,011,316 - HSERO_RS21890 0.90 -0.4 5,011,424 + +0.8 5,011,432 - -0.2 5,011,432 - -0.6 5,011,432 - +0.1 5,011,432 - -2.6 5,011,453 + -1.3 5,011,460 + -0.9 5,011,468 - +0.4 5,011,626 + +0.3 5,011,634 - +3.3
Or see this region's nucleotide sequence