Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS17935 and HSERO_RS17940 are separated by 84 nucleotides HSERO_RS17940 and HSERO_RS17945 overlap by 4 nucleotides HSERO_RS17945 and HSERO_RS17950 are separated by 5 nucleotides
HSERO_RS17935: HSERO_RS17935 - beta-lactamase, at 4,120,211 to 4,121,029
_RS17935
HSERO_RS17940: HSERO_RS17940 - hypothetical protein, at 4,121,114 to 4,121,509
_RS17940
HSERO_RS17945: HSERO_RS17945 - hypothetical protein, at 4,121,506 to 4,122,366
_RS17945
HSERO_RS17950: HSERO_RS17950 - hypothetical protein, at 4,122,372 to 4,122,797
_RS17950
Position (kb) 4121
4122
4123 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4120.560 kb on + strand, within HSERO_RS17935 at 4120.565 kb on + strand, within HSERO_RS17935 at 4120.571 kb on - strand, within HSERO_RS17935 at 4120.703 kb on - strand, within HSERO_RS17935 at 4120.727 kb on - strand at 4120.727 kb on - strand, within HSERO_RS17935 at 4120.759 kb on - strand, within HSERO_RS17935 at 4120.775 kb on - strand at 4120.967 kb on - strand at 4121.022 kb on - strand at 4121.142 kb on - strand at 4121.316 kb on - strand, within HSERO_RS17940 at 4121.440 kb on + strand, within HSERO_RS17940 at 4121.704 kb on + strand, within HSERO_RS17945 at 4121.712 kb on - strand, within HSERO_RS17945 at 4121.712 kb on - strand, within HSERO_RS17945 at 4121.712 kb on - strand, within HSERO_RS17945 at 4121.754 kb on + strand, within HSERO_RS17945 at 4121.895 kb on + strand, within HSERO_RS17945 at 4121.969 kb on + strand, within HSERO_RS17945 at 4121.974 kb on + strand, within HSERO_RS17945 at 4121.974 kb on + strand, within HSERO_RS17945 at 4121.982 kb on - strand, within HSERO_RS17945 at 4121.982 kb on - strand, within HSERO_RS17945 at 4122.027 kb on + strand, within HSERO_RS17945 at 4122.035 kb on - strand, within HSERO_RS17945 at 4122.066 kb on - strand, within HSERO_RS17945 at 4122.066 kb on - strand, within HSERO_RS17945 at 4122.066 kb on - strand, within HSERO_RS17945 at 4122.111 kb on - strand, within HSERO_RS17945 at 4122.185 kb on + strand, within HSERO_RS17945 at 4122.190 kb on + strand, within HSERO_RS17945 at 4122.285 kb on + strand at 4122.470 kb on + strand, within HSERO_RS17950 at 4122.581 kb on + strand, within HSERO_RS17950 at 4122.705 kb on + strand, within HSERO_RS17950 at 4122.716 kb on + strand, within HSERO_RS17950 at 4122.739 kb on - strand, within HSERO_RS17950 at 4122.744 kb on - strand, within HSERO_RS17950 at 4122.778 kb on + strand at 4122.778 kb on + strand at 4122.778 kb on + strand at 4123.014 kb on - strand at 4123.026 kb on - strand at 4123.114 kb on + strand at 4123.122 kb on - strand at 4123.125 kb on + strand at 4123.128 kb on - strand at 4123.128 kb on - strand at 4123.128 kb on - strand at 4123.191 kb on + strand at 4123.239 kb on - strand at 4123.244 kb on - strand at 4123.258 kb on + strand at 4123.265 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 4,120,560 + HSERO_RS17935 0.43 -0.3 4,120,565 + HSERO_RS17935 0.43 -0.6 4,120,571 - HSERO_RS17935 0.44 +0.3 4,120,703 - HSERO_RS17935 0.60 -0.6 4,120,727 - +1.0 4,120,727 - HSERO_RS17935 0.63 -0.1 4,120,759 - HSERO_RS17935 0.67 +1.0 4,120,775 - -0.0 4,120,967 - -0.4 4,121,022 - +0.2 4,121,142 - -2.0 4,121,316 - HSERO_RS17940 0.51 +0.9 4,121,440 + HSERO_RS17940 0.82 +0.3 4,121,704 + HSERO_RS17945 0.23 +0.5 4,121,712 - HSERO_RS17945 0.24 +2.1 4,121,712 - HSERO_RS17945 0.24 +1.6 4,121,712 - HSERO_RS17945 0.24 +1.0 4,121,754 + HSERO_RS17945 0.29 -0.7 4,121,895 + HSERO_RS17945 0.45 +0.0 4,121,969 + HSERO_RS17945 0.54 -0.3 4,121,974 + HSERO_RS17945 0.54 -0.9 4,121,974 + HSERO_RS17945 0.54 -0.4 4,121,982 - HSERO_RS17945 0.55 -0.5 4,121,982 - HSERO_RS17945 0.55 +0.6 4,122,027 + HSERO_RS17945 0.61 -0.0 4,122,035 - HSERO_RS17945 0.61 +0.9 4,122,066 - HSERO_RS17945 0.65 +2.9 4,122,066 - HSERO_RS17945 0.65 -1.3 4,122,066 - HSERO_RS17945 0.65 +0.4 4,122,111 - HSERO_RS17945 0.70 -0.5 4,122,185 + HSERO_RS17945 0.79 +0.7 4,122,190 + HSERO_RS17945 0.79 +1.3 4,122,285 + -0.4 4,122,470 + HSERO_RS17950 0.23 -0.8 4,122,581 + HSERO_RS17950 0.49 +0.4 4,122,705 + HSERO_RS17950 0.78 -0.2 4,122,716 + HSERO_RS17950 0.81 -0.2 4,122,739 - HSERO_RS17950 0.86 -0.1 4,122,744 - HSERO_RS17950 0.87 -0.7 4,122,778 + -0.0 4,122,778 + -0.1 4,122,778 + +0.8 4,123,014 - -0.2 4,123,026 - -0.2 4,123,114 + -0.6 4,123,122 - -0.1 4,123,125 + -2.3 4,123,128 - +0.4 4,123,128 - -0.8 4,123,128 - +0.8 4,123,191 + -0.2 4,123,239 - +0.3 4,123,244 - +0.2 4,123,258 + -0.8 4,123,265 + -1.8
Or see this region's nucleotide sequence