Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2773

Experiment: Cholin acetate 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 20 mM
2,877,998	+		Ga0059261_2772	0.44	+0.9
2,877,998	+		Ga0059261_2772	0.44	-1.0
2,877,999	-		Ga0059261_2772	0.44	+0.4
2,878,001	+		Ga0059261_2772	0.44	-1.1
2,878,001	+		Ga0059261_2772	0.44	-0.3
2,878,001	+		Ga0059261_2772	0.44	-1.0
2,878,002	-				+0.8
2,878,002	-		Ga0059261_2772	0.44	-0.2
2,878,097	+		Ga0059261_2772	0.52	-0.0
2,878,097	+		Ga0059261_2772	0.52	-0.2
2,878,098	-		Ga0059261_2772	0.52	-0.1
2,878,214	+		Ga0059261_2772	0.62	-0.4
2,878,214	+		Ga0059261_2772	0.62	+0.5
2,878,214	+		Ga0059261_2772	0.62	-0.3
2,878,214	+		Ga0059261_2772	0.62	+0.1
2,878,214	+		Ga0059261_2772	0.62	-2.0
2,878,214	+		Ga0059261_2772	0.62	+0.2
2,878,214	+		Ga0059261_2772	0.62	-0.5
2,878,214	+		Ga0059261_2772	0.62	+0.8
2,878,215	-		Ga0059261_2772	0.62	+0.6
2,878,215	-		Ga0059261_2772	0.62	-0.4
2,878,215	-		Ga0059261_2772	0.62	+0.0
2,878,535	+		Ga0059261_2772	0.90	-1.1
2,878,535	+		Ga0059261_2772	0.90	+0.6
2,878,535	+		Ga0059261_2772	0.90	+0.1
2,878,535	+		Ga0059261_2772	0.90	-0.6
2,878,535	+		Ga0059261_2772	0.90	+0.3
2,878,535	+		Ga0059261_2772	0.90	+0.9
2,878,536	-		Ga0059261_2772	0.90	-0.0
2,878,536	-		Ga0059261_2772	0.90	-0.4
2,878,536	-		Ga0059261_2772	0.90	+1.2
2,878,536	-		Ga0059261_2772	0.90	+0.7
2,878,536	-		Ga0059261_2772	0.90	-1.0
2,878,536	-		Ga0059261_2772	0.90	+0.4
2,878,536	-		Ga0059261_2772	0.90	-0.5
2,878,536	-		Ga0059261_2772	0.90	-0.1
2,878,536	-		Ga0059261_2772	0.90	+0.7
2,878,653	+				+0.0
2,878,653	+				+0.1
2,878,653	+				-0.5
2,878,653	+				-1.5
2,878,653	+				-0.8
2,878,653	+				+0.7
2,878,654	-				-0.3
2,878,654	-				+0.4
2,878,654	-				-0.7
2,878,654	-				+0.2
2,878,654	-				+1.0
2,878,655	+				-0.5
2,878,655	+				-0.0
2,878,655	+				-0.5
2,878,655	+				+1.8
2,878,655	+				-0.4
2,878,655	+				-0.4
2,878,655	+				+0.3
2,878,655	+				-0.3
2,878,655	+				-0.4
2,878,656	-				+0.3
2,878,656	-				-1.4
2,878,656	-				+0.9
2,878,656	-				-0.0
2,878,656	-				-2.9
2,878,656	-				-1.0
2,878,869	+				+0.0
2,878,869	+				-0.5
2,878,870	-				-2.5
2,878,870	-				-1.1
2,878,946	+		Ga0059261_2773	0.18	+0.4
2,878,946	+		Ga0059261_2773	0.18	+0.2
2,878,947	-		Ga0059261_2773	0.18	-0.3
2,878,947	-		Ga0059261_2773	0.18	-0.8
2,879,161	+		Ga0059261_2773	0.42	-0.5
2,879,161	+		Ga0059261_2773	0.42	-0.8
2,879,162	-		Ga0059261_2773	0.42	-0.0
2,879,162	-		Ga0059261_2773	0.42	+0.3
2,879,162	-		Ga0059261_2773	0.42	+0.9
2,879,162	-		Ga0059261_2773	0.42	-0.5
2,879,218	+		Ga0059261_2773	0.48	+0.3
2,879,218	+		Ga0059261_2773	0.48	-0.5
2,879,219	-		Ga0059261_2773	0.48	-0.1
2,879,219	-		Ga0059261_2773	0.48	-0.2
2,879,219	-		Ga0059261_2773	0.48	+0.2
2,879,219	-		Ga0059261_2773	0.48	+0.1
2,879,219	-		Ga0059261_2773	0.48	+0.2
2,879,219	-		Ga0059261_2773	0.48	-0.2
2,879,219	-		Ga0059261_2773	0.48	+0.4
2,879,219	-		Ga0059261_2773	0.48	-1.5
2,879,242	+		Ga0059261_2773	0.50	+1.0
2,879,242	+		Ga0059261_2773	0.50	-0.8
2,879,242	+		Ga0059261_2773	0.50	-0.3
2,879,242	+		Ga0059261_2773	0.50	-0.5
2,879,242	+		Ga0059261_2773	0.50	-0.4
2,879,243	-		Ga0059261_2773	0.51	-0.6
2,879,243	-		Ga0059261_2773	0.51	+0.4
2,879,243	-		Ga0059261_2773	0.51	-0.9
2,879,311	+		Ga0059261_2773	0.58	+0.2
2,879,311	+		Ga0059261_2773	0.58	-0.3
2,879,311	+				+0.4
2,879,311	+		Ga0059261_2773	0.58	-0.3
2,879,311	+		Ga0059261_2773	0.58	+0.0
2,879,311	+		Ga0059261_2773	0.58	+0.5
2,879,312	-		Ga0059261_2773	0.58	+0.1
2,879,312	-		Ga0059261_2773	0.58	+0.2
2,879,312	-		Ga0059261_2773	0.58	+0.0
2,879,312	-		Ga0059261_2773	0.58	-0.2
2,879,312	-		Ga0059261_2773	0.58	+0.7
2,879,312	-		Ga0059261_2773	0.58	+2.4
2,879,312	-		Ga0059261_2773	0.58	+0.3
2,879,312	-		Ga0059261_2773	0.58	-0.2
2,879,312	-		Ga0059261_2773	0.58	-0.9
2,879,449	+		Ga0059261_2773	0.73	+1.2
2,879,449	+		Ga0059261_2773	0.73	+0.9
2,879,449	+		Ga0059261_2773	0.73	-0.2
2,879,449	+		Ga0059261_2773	0.73	-0.1
2,879,450	-		Ga0059261_2773	0.73	-0.6
2,879,450	-		Ga0059261_2773	0.73	-0.7
2,879,450	-				+0.4
2,879,450	-		Ga0059261_2773	0.73	-0.0
2,879,450	-		Ga0059261_2773	0.73	+0.3
2,879,541	+		Ga0059261_2773	0.83	-0.4
2,879,541	+		Ga0059261_2773	0.83	+0.6
2,879,541	+		Ga0059261_2773	0.83	+1.4
2,879,670	+				+0.4
2,879,670	+				+0.1
2,879,670	+				+0.2
2,879,671	-				+0.0
2,879,671	-				-0.6
2,879,671	-				+0.4
2,879,746	+				-1.2
2,879,746	+				+0.2
2,879,746	+				-0.1
2,879,747	-				+0.5
2,879,747	-				-1.5
2,879,747	-				+0.2
2,879,747	-				+0.8
2,879,747	-				+0.2
2,879,747	-				-2.1
2,879,747	-				-0.3
2,879,911	+		Ga0059261_2774	0.43	+0.6
2,879,911	+		Ga0059261_2774	0.43	+1.0
2,879,911	+		Ga0059261_2774	0.43	+0.5
2,879,911	+		Ga0059261_2774	0.43	+0.9
2,880,179	+				-1.0
2,880,179	+				+0.1
2,880,180	-				-1.6
2,880,183	+				+0.4
2,880,183	+				-1.3
2,880,183	+				-0.0
2,880,183	+				-0.1
2,880,184	-				+0.6
2,880,184	-				-0.6
2,880,184	-				+0.0
2,880,316	+				+0.8
2,880,317	-				+0.5
2,880,318	+				-0.7
2,880,318	+				+0.6
2,880,318	+				-0.6
2,880,319	-				+0.3
2,880,319	-				-0.1
2,880,319	-				+0.2
2,880,353	+				+1.0
2,880,353	+				-0.3
2,880,353	+				-0.1
2,880,353	+				-0.4
2,880,354	-				-1.4
2,880,354	-				+0.4
2,880,354	-				-0.8
2,880,354	-				+0.0
2,880,354	-				+0.4
2,880,409	+				-0.6
2,880,410	-				-0.7
2,880,410	-				+0.0
2,880,410	-				-1.1
2,880,459	+				+0.0
2,880,459	+				-1.4
2,880,459	+				+0.6
2,880,460	-				-1.2
2,880,460	-				-0.8
2,880,502	+				-0.8
2,880,502	+				-0.4
2,880,502	+				+2.9
2,880,502	+				+0.2
2,880,502	+				-1.4
2,880,619	-				-1.0
2,880,619	-				-0.1