Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03554

Experiment: Beta-Lactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose (C)
3,709,560	-		CCNA_03552	0.64	+0.6
3,709,582	+		CCNA_03552	0.66	+1.6
3,709,592	+		CCNA_03552	0.67	+2.5
3,709,614	-		CCNA_03552	0.69	+1.5
3,709,629	-		CCNA_03552	0.70	+0.4
3,709,630	+		CCNA_03552	0.70	+1.0
3,709,717	+		CCNA_03552	0.77	+1.5
3,709,725	-		CCNA_03552	0.78	+1.6
3,709,758	+		CCNA_03552	0.81	+2.0
3,709,759	-		CCNA_03552	0.81	-1.3
3,709,766	+		CCNA_03552	0.81	+1.8
3,709,766	-		CCNA_03552	0.81	+0.1
3,709,839	+		CCNA_03552	0.88	+1.8
3,709,870	-				+0.6
3,709,881	+				+1.9
3,709,881	+				+1.2
3,709,883	-				+1.4
3,709,886	+				+1.7
3,709,918	-				+1.0
3,709,953	-				+0.2
3,709,963	+				+0.8
3,709,968	+				+1.4
3,710,000	+				+0.7
3,710,008	-				-0.4
3,710,014	+				+1.0
3,710,017	-				-2.9
3,710,022	-				-2.3
3,710,022	-				-0.8
3,710,048	+				+0.9
3,710,089	-		CCNA_03553	0.16	-0.8
3,710,093	-		CCNA_03553	0.16	-0.6
3,710,157	+		CCNA_03553	0.29	+0.6
3,710,157	+				+1.6
3,710,220	-		CCNA_03553	0.41	-1.4
3,710,270	-		CCNA_03553	0.50	+1.1
3,710,271	-		CCNA_03553	0.51	-2.2
3,710,291	+		CCNA_03553	0.55	+1.0
3,710,307	-		CCNA_03553	0.58	-1.1
3,710,308	-		CCNA_03553	0.58	-1.0
3,710,318	-		CCNA_03553	0.60	+0.7
3,710,397	+		CCNA_03553	0.75	+1.6
3,710,414	+		CCNA_03553	0.78	-0.4
3,710,470	+		CCNA_03553	0.89	+1.2
3,710,478	-				-0.6
3,710,498	-				-0.3
3,710,515	+				+2.6
3,710,515	+				+1.5
3,710,523	-				+0.1
3,710,547	-				+1.2
3,710,554	+				+1.9
3,710,555	+				+1.2
3,710,562	-				-0.0
3,710,562	-				+0.2
3,710,562	-				+0.8
3,710,562	-				+0.3
3,710,562	-				+0.4
3,710,598	+				+0.1
3,710,598	+				+1.6
3,710,598	+				+1.5
3,710,598	+				+2.2
3,710,598	+				+1.6
3,710,598	+				+0.1
3,710,598	+				+1.3
3,710,598	+				+1.7
3,710,598	+				+1.6
3,710,606	-				-0.5
3,710,606	-				-0.7
3,710,606	-				-1.7
3,710,606	-				+0.3
3,710,606	-				+0.0
3,710,606	-				+0.2
3,710,606	-				-0.7
3,710,606	-				-1.1
3,710,606	-				-0.2
3,710,610	+				+1.7
3,710,618	-				+0.1
3,710,664	+		CCNA_03554	0.10	+1.7
3,710,672	-		CCNA_03554	0.11	-0.8
3,710,691	-		CCNA_03554	0.12	-0.8
3,710,691	-		CCNA_03554	0.12	-2.5
3,710,732	-		CCNA_03554	0.16	+0.8
3,710,732	-		CCNA_03554	0.16	-1.8
3,710,733	-		CCNA_03554	0.16	-1.6
3,710,803	-		CCNA_03554	0.21	-1.0
3,710,820	+		CCNA_03554	0.22	+1.7
3,710,827	+		CCNA_03554	0.23	+0.4
3,710,827	+		CCNA_03554	0.23	+1.4
3,710,830	-		CCNA_03554	0.23	-1.2
3,710,830	-		CCNA_03554	0.23	+0.7
3,710,830	-		CCNA_03554	0.23	-1.4
3,710,832	+		CCNA_03554	0.23	+0.7
3,710,836	+		CCNA_03554	0.23	+1.3
3,710,873	+		CCNA_03554	0.26	+0.2
3,710,874	+		CCNA_03554	0.26	+1.7
3,710,876	-		CCNA_03554	0.26	+0.1
3,710,898	-		CCNA_03554	0.28	-0.3
3,710,906	+		CCNA_03554	0.29	+1.6
3,710,912	-		CCNA_03554	0.29	-0.0
3,710,919	+		CCNA_03554	0.30	+1.6
3,710,925	+		CCNA_03554	0.30	+0.8
3,710,926	+		CCNA_03554	0.30	+2.3
3,710,927	-		CCNA_03554	0.30	-1.5
3,710,927	-		CCNA_03554	0.30	-0.7
3,710,939	-		CCNA_03554	0.31	+1.0
3,710,947	+		CCNA_03554	0.32	+1.9
3,710,976	+		CCNA_03554	0.34	+0.4
3,710,976	+		CCNA_03554	0.34	+1.4
3,710,986	+		CCNA_03554	0.35	+1.3
3,710,986	+		CCNA_03554	0.35	+0.6
3,711,020	+		CCNA_03554	0.37	+0.9
3,711,025	+		CCNA_03554	0.38	+1.2
3,711,033	-		CCNA_03554	0.38	-0.4
3,711,033	-		CCNA_03554	0.38	+0.8
3,711,033	-		CCNA_03554	0.38	-0.2
3,711,042	+		CCNA_03554	0.39	+0.9
3,711,042	+		CCNA_03554	0.39	+2.4
3,711,052	+		CCNA_03554	0.40	+1.3
3,711,081	-		CCNA_03554	0.42	-0.2
3,711,086	-		CCNA_03554	0.42	+0.3
3,711,139	+		CCNA_03554	0.46	+1.4
3,711,144	+		CCNA_03554	0.47	+1.2
3,711,175	-		CCNA_03554	0.49	-0.6
3,711,403	+		CCNA_03554	0.67	+0.6
3,711,438	+		CCNA_03554	0.69	+0.3
3,711,438	+		CCNA_03554	0.69	+2.1
3,711,446	-		CCNA_03554	0.70	+0.5
3,711,446	-		CCNA_03554	0.70	-0.4
3,711,446	-		CCNA_03554	0.70	-0.2
3,711,446	-		CCNA_03554	0.70	-1.4
3,711,446	-		CCNA_03554	0.70	+0.8
3,711,446	-		CCNA_03554	0.70	+0.5
3,711,446	-		CCNA_03554	0.70	+0.0
3,711,446	-		CCNA_03554	0.70	+1.0
3,711,446	-		CCNA_03554	0.70	-0.4
3,711,488	-		CCNA_03554	0.73	-0.5
3,711,488	-		CCNA_03554	0.73	-0.5
3,711,528	+		CCNA_03554	0.76	+0.0
3,711,528	+		CCNA_03554	0.76	+0.7
3,711,528	+		CCNA_03554	0.76	+0.8
3,711,528	+		CCNA_03554	0.76	+1.3
3,711,528	+		CCNA_03554	0.76	+1.0
3,711,528	+		CCNA_03554	0.76	+1.6
3,711,536	-		CCNA_03554	0.77	+0.6
3,711,536	-		CCNA_03554	0.77	+0.6
3,711,536	-		CCNA_03554	0.77	+0.2
3,711,600	+		CCNA_03554	0.81	+2.2
3,711,624	+		CCNA_03554	0.83	+1.8
3,711,624	+		CCNA_03554	0.83	+1.3
3,711,632	-		CCNA_03554	0.84	+0.7
3,711,632	-		CCNA_03554	0.84	+1.6
3,711,632	-		CCNA_03554	0.84	-1.2
3,711,632	-		CCNA_03554	0.84	+0.9
3,711,638	-		CCNA_03554	0.84	-0.4
3,711,642	+		CCNA_03554	0.85	+1.6
3,711,642	+		CCNA_03554	0.85	+0.8
3,711,650	-		CCNA_03554	0.85	+0.1
3,711,703	+		CCNA_03554	0.89	+1.1
3,711,711	-		CCNA_03554	0.90	-0.2
3,711,713	-				+0.7
3,711,713	-				+0.6
3,711,737	-				+0.9
3,711,777	+				+1.8
3,711,813	+				+1.6
3,711,844	+				+1.7
3,711,852	-				+1.1
3,711,881	+				+1.7
3,711,913	-				+0.4
3,711,946	-				+1.3
3,711,967	+				+0.9
3,711,996	+		CCNA_03555	0.13	+1.9
3,712,117	+		CCNA_03555	0.29	+2.5
3,712,196	+		CCNA_03555	0.40	+1.7
3,712,215	-		CCNA_03555	0.43	+0.6
3,712,218	+		CCNA_03555	0.43	+2.2
3,712,226	-		CCNA_03555	0.44	+1.0
3,712,230	-		CCNA_03555	0.45	+1.1
3,712,262	-		CCNA_03555	0.49	+0.4
3,712,262	-		CCNA_03555	0.49	+1.7
3,712,262	-		CCNA_03555	0.49	-0.7
3,712,264	+		CCNA_03555	0.49	+2.2
3,712,266	+		CCNA_03555	0.49	+1.5
3,712,272	-		CCNA_03555	0.50	+1.8
3,712,272	-		CCNA_03555	0.50	-1.2
3,712,283	+		CCNA_03555	0.52	+1.5
3,712,284	-		CCNA_03555	0.52	+0.1
3,712,293	+		CCNA_03555	0.53	+1.4
3,712,296	-		CCNA_03555	0.53	-0.2
3,712,299	-		CCNA_03555	0.54	+2.3
3,712,301	-		CCNA_03555	0.54	-0.2
3,712,309	+		CCNA_03555	0.55	+1.6
3,712,314	+		CCNA_03555	0.56	+2.1
3,712,339	+		CCNA_03555	0.59	+1.5
3,712,360	+		CCNA_03555	0.62	+1.8
3,712,394	+		CCNA_03555	0.66	+2.1
3,712,402	-		CCNA_03555	0.67	+0.9
3,712,444	+		CCNA_03555	0.73	+2.1
3,712,457	-		CCNA_03555	0.75	+1.5
3,712,457	-		CCNA_03555	0.75	-0.4
3,712,541	-		CCNA_03555	0.86	+1.3
3,712,542	-		CCNA_03555	0.86	+1.4
3,712,604	+				+1.6
3,712,605	+				+0.2
3,712,613	-				+4.6
3,712,646	+				+2.7
3,712,702	+		CCNA_03556	0.15	+1.4
3,712,705	-		CCNA_03556	0.16	+2.6
3,712,795	-		CCNA_03556	0.44	+2.0
3,712,828	+		CCNA_03556	0.54	+0.7