Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03327

Experiment: Beta-Lactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose (C)
3,507,706	-		CCNA_03326	0.56	-0.1
3,507,713	-		CCNA_03326	0.57	-1.2
3,507,727	-		CCNA_03326	0.57	+0.1
3,507,738	+		CCNA_03326	0.58	+1.2
3,507,738	+		CCNA_03326	0.58	+1.4
3,507,744	+		CCNA_03326	0.58	+1.5
3,507,746	-		CCNA_03326	0.58	-0.1
3,507,785	+		CCNA_03326	0.60	+0.7
3,507,788	-		CCNA_03326	0.60	-0.8
3,507,796	+		CCNA_03326	0.61	-0.0
3,507,816	+		CCNA_03326	0.62	+1.3
3,507,827	+		CCNA_03326	0.62	+1.8
3,507,852	+		CCNA_03326	0.64	+1.5
3,507,857	+		CCNA_03326	0.64	+1.3
3,507,862	+		CCNA_03326	0.64	+0.9
3,507,862	+		CCNA_03326	0.64	+1.1
3,507,862	+		CCNA_03326	0.64	+2.2
3,507,862	+		CCNA_03326	0.64	+1.2
3,507,870	-		CCNA_03326	0.65	-2.3
3,507,978	-		CCNA_03326	0.70	-1.1
3,507,979	+		CCNA_03326	0.70	-0.3
3,507,984	+		CCNA_03326	0.70	+1.7
3,507,987	-		CCNA_03326	0.71	+0.3
3,507,990	+		CCNA_03326	0.71	+0.3
3,508,041	+		CCNA_03326	0.73	+0.9
3,508,041	+		CCNA_03326	0.73	-0.6
3,508,062	+		CCNA_03326	0.74	-0.5
3,508,070	-		CCNA_03326	0.75	+0.2
3,508,082	+		CCNA_03326	0.75	+0.2
3,508,090	-		CCNA_03326	0.76	-1.0
3,508,107	-		CCNA_03326	0.77	-0.1
3,508,123	+		CCNA_03326	0.77	+1.6
3,508,199	-		CCNA_03326	0.81	+0.2
3,508,207	-		CCNA_03326	0.82	+1.2
3,508,260	-		CCNA_03326	0.84	-0.3
3,508,270	-		CCNA_03326	0.85	+0.4
3,508,282	+		CCNA_03326	0.85	+0.2
3,508,352	+		CCNA_03326	0.89	+0.7
3,508,360	-		CCNA_03326	0.89	-1.0
3,508,360	-		CCNA_03326	0.89	-0.3
3,508,392	+				-0.4
3,508,407	+				-0.0
3,508,433	+				+0.4
3,508,441	-				-0.2
3,508,441	-				-0.6
3,508,457	+				+0.8
3,508,457	-				-1.3
3,508,492	+				+0.1
3,508,500	-				+0.3
3,508,520	-				-1.5
3,508,571	-				-0.1
3,508,571	-				+0.1
3,508,587	+				+0.0
3,508,611	-				+1.2
3,508,615	+				-0.8
3,508,615	+				+0.4
3,508,615	+				+0.5
3,508,615	+				+0.1
3,508,615	+				+0.3
3,508,615	+				-0.6
3,508,615	+				+3.3
3,508,615	+				-2.0
3,508,623	-				-2.2
3,508,623	-				-0.3
3,508,623	-				+0.4
3,508,623	-				-0.8
3,508,625	+				+0.4
3,508,651	+				+1.0
3,508,682	-				-0.4
3,508,692	-				-2.0
3,508,703	-				-1.2
3,508,772	+		CCNA_03327	0.18	-2.1
3,508,780	-		CCNA_03327	0.20	+0.0
3,508,795	+		CCNA_03327	0.24	+1.4
3,508,796	+		CCNA_03327	0.25	+1.2
3,508,796	+		CCNA_03327	0.25	+0.6
3,508,804	-		CCNA_03327	0.27	+2.2
3,508,804	-		CCNA_03327	0.27	-0.0
3,508,806	+		CCNA_03327	0.27	-0.1
3,508,809	-		CCNA_03327	0.28	+0.7
3,508,814	-		CCNA_03327	0.30	+0.4
3,508,832	-		CCNA_03327	0.34	+1.2
3,508,834	+		CCNA_03327	0.35	+0.4
3,508,834	+		CCNA_03327	0.35	-0.0
3,508,899	+		CCNA_03327	0.53	+1.4
3,508,899	+		CCNA_03327	0.53	+0.0
3,508,899	+		CCNA_03327	0.53	-0.8
3,508,907	-		CCNA_03327	0.55	-0.5
3,508,925	+		CCNA_03327	0.60	+1.4
3,508,940	-		CCNA_03327	0.64	-0.1
3,508,943	-		CCNA_03327	0.65	-0.1
3,508,979	+		CCNA_03327	0.75	+0.5
3,508,992	-		CCNA_03327	0.78	-0.4
3,509,021	+		CCNA_03327	0.86	+1.7
3,509,029	-		CCNA_03327	0.88	+0.2
3,509,033	+		CCNA_03327	0.89	+1.1
3,509,111	+				-0.9
3,509,119	+				+0.8
3,509,119	+				+0.9
3,509,121	-				+1.6
3,509,127	-				+0.7
3,509,193	-		CCNA_03328	0.14	+0.1
3,509,198	-		CCNA_03328	0.14	+0.6
3,509,198	-		CCNA_03328	0.14	-0.4
3,509,208	-		CCNA_03328	0.16	-0.2
3,509,218	-		CCNA_03328	0.17	+1.6
3,509,348	-		CCNA_03328	0.33	+0.9
3,509,363	+		CCNA_03328	0.34	-0.7
3,509,363	+		CCNA_03328	0.34	+0.7
3,509,363	+		CCNA_03328	0.34	-2.1
3,509,368	+		CCNA_03328	0.35	-1.3
3,509,368	+		CCNA_03328	0.35	-0.1
3,509,371	-		CCNA_03328	0.35	+1.3
3,509,373	+		CCNA_03328	0.36	-0.1
3,509,376	-		CCNA_03328	0.36	+2.2
3,509,376	-		CCNA_03328	0.36	+2.0
3,509,376	-		CCNA_03328	0.36	+1.2
3,509,376	-		CCNA_03328	0.36	+1.6
3,509,376	-		CCNA_03328	0.36	+1.3
3,509,408	-		CCNA_03328	0.40	+2.1
3,509,409	-		CCNA_03328	0.40	+1.7
3,509,439	+		CCNA_03328	0.44	+1.7
3,509,447	-		CCNA_03328	0.45	+2.3
3,509,461	+		CCNA_03328	0.46	+0.4
3,509,485	-		CCNA_03328	0.49	-0.2
3,509,485	-		CCNA_03328	0.49	+2.1
3,509,518	+		CCNA_03328	0.53	-3.4
3,509,520	+		CCNA_03328	0.53	+1.1
3,509,640	+		CCNA_03328	0.68	-1.4
3,509,713	+		CCNA_03328	0.77	+0.1
3,509,728	+		CCNA_03328	0.79	-1.2
3,509,728	+		CCNA_03328	0.79	-1.3
3,509,728	+		CCNA_03328	0.79	-0.5
3,509,731	-		CCNA_03328	0.79	-1.8
3,509,736	-		CCNA_03328	0.79	+0.5
3,509,736	-				-0.1
3,509,736	-		CCNA_03328	0.79	+0.8
3,509,736	-		CCNA_03328	0.79	-1.0
3,509,736	-		CCNA_03328	0.79	-0.6
3,509,736	-		CCNA_03328	0.79	-0.3
3,509,736	-		CCNA_03328	0.79	+0.6
3,509,787	-		CCNA_03328	0.86	-1.2
3,509,806	-		CCNA_03328	0.88	+1.2
3,509,839	+				-1.9
3,509,857	-				+1.3
3,509,867	-				+2.0
3,509,877	-				+2.1
3,509,884	+				-0.3
3,509,899	+				-1.3
3,509,899	+				-1.2
3,509,935	-				-0.3
3,509,940	+				-1.9
3,509,940	+				-2.0
3,509,940	+				-0.1
3,509,940	+				-0.7
3,509,940	+				-1.5
3,509,940	+				-1.3
3,509,940	+				-0.9
3,509,940	+				-0.7
3,509,948	-				+0.6
3,509,948	-				+0.1
3,509,948	-				+0.5
3,509,948	-				+1.0
3,509,948	-				+0.9
3,509,950	+				-1.1
3,509,950	+				-2.9